RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 UBE2J1Q9Y385 318 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-204ENST00000474020 TMED3Q9Y3Q3 217 aa5.04□□□□□ -1.6
ATPAF1-204ENST00000474020 PCNX3Q9H6A9 2034 aa5.04□□□□□ -1.6
ATPAF1-204ENST00000474020 TRAV17A0A0B4J275 112 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 RNF222A6NCQ9 220 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 CD300LBA8K4G0 201 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 A8MXK9 166 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 ZNF732B4DXR9 585 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 F8VVB4 439 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 F8VWA3 439 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 J3QT63 122 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 WRBO00258 174 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 CDX4O14627 284 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 ADAP1O75689 374 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 LYL1P12980 280 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 TUBG1P23258 451 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 IL32P24001 234 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 RPL12P30050 165 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 OPRM1P35372 400 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 EIF2S3P41091 472 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 GPM6AP51674 278 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 SOX8P57073 446 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 VAMP2P63027 116 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 RAB32Q13637 225 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 ANKRD55Q3KP44 614 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 PIGYQ3MUY2 71 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 BEX5Q5H9J7 111 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 DMRTC1Q5HYR2 192 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 SPIN3Q5JUX0 258 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 GPR157Q5UAW9 335 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 Q6ZS49 121 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 RNF144BQ7Z419 303 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 GLRX5Q86SX6 157 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 ZNF695Q8IW36 515 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 FOXRED2Q8IWF2 684 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 SPAG16Q8N0X2 631 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 CPEB3Q8NE35 698 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 SLC30A7Q8NEW0 376 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 OR1S1Q8NH92 325 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 GTF3AQ92664 365 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 SLAMF9Q96A28 289 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 SARAFQ96BY9 339 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 GALNT14Q96FL9 552 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 ABHD14BQ96IU4 210 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 PRRX2Q99811 253 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 SLC5A7Q9GZV3 580 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 DEFB127Q9H1M4 99 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 FN3KRPQ9HA64 309 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 TAF9BQ9HBM6 251 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 TUBG2Q9NRH3 451 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 DECR2Q9NUI1 292 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 IL17BQ9UHF5 180 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 TUBD1Q9UJT1 453 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 LSM5Q9Y4Y9 91 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 R4GN57 208 aa5.03□□□□□ -1.6
ATPAF1-204ENST00000474020 FASNP49327 2511 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 ALPK2Q86TB3 2170 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 IGKV1-27A0A075B6S5 117 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 IGKV1-12A0A0C4DH73 117 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 TMEM210A6NLX4 147 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 RNF212BA8MTL3 300 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 ZNF705EA8MWA4 302 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 TRDCB7Z8K6 153 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 GPR31O00270 319 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 DEGS1O15121 323 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 BET1O15155 118 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 ST8SIA3O43173 380 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 PHF1O43189 567 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 GPR137BO60478 399 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 LRP3O75074 770 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 SS18L1O75177 396 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 DEDDO75618 318 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 CDS2O95674 445 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 PPYP01298 95 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 IGKV1D-12P01611 117 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 GAPDHP04406 335 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 PRKACAP17612 351 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 BCL3P20749 454 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 PTGER4P35408 488 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 P2RY1P47900 373 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 RND3P61587 244 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 SUPT4H1P63272 117 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 DEFA5Q01523 94 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 IL24Q13007 206 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 GABRA6Q16445 453 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 PHLDA2Q53GA4 152 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 FAM74A1Q5RGS3 127 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 GGNBP1Q5YKI7 109 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 OR2A2Q6IF42 318 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 HAGHLQ6PII5 290 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 FBXW12Q6X9E4 464 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 C1orf174Q8IYL3 243 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 SVBPQ8N300 66 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 COMMD1Q8N668 190 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 LRTM2Q8N967 370 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 RELL2Q8NC24 303 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 RNASE11Q8TAA1 199 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 FGFBP3Q8TAT2 258 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 NEU4Q8WWR8 484 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 OR5P3Q8WZ94 311 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms