RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 USF1P22415 310 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-212ENST00000473961 CCNOP22674 350 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 HOXA9P31269 272 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 SDC4P31431 198 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 ARR3P36575 388 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 ACTR1BP42025 376 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 CSNK1A1P48729 337 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 RGS6P49758 472 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 FABP6P51161 128 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF138P52744 262 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 SYNJ2BPP57105 145 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 TAS2R39P59534 338 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 PSPHP78330 225 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 KIR2DS1Q14954 304 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 COL24A1Q17RW2 1714 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 LGALSLQ3ZCW2 172 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-212ENST00000473961 ORMDL2Q53FV1 153 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 TCEAL5Q5H9L2 206 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 SPANXN3Q5MJ09 141 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 SAXO2Q658L1 398 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 FAM131AQ6UXB0 335 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 PCP2Q8IVA1 136 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 ATPAF2Q8N5M1 289 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 OR52E4Q8NGH9 312 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 OR8D4Q8NGM9 314 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 OR2T4Q8NH00 348 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 MRGPRFQ96AM1 343 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 LRRC58Q96CX6 371 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 WFIKKN1Q96NZ8 548 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 COL21A1Q96P44 957 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 PFDN5Q99471 154 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 BBS2Q9BXC9 721 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 NKX6-2Q9C056 277 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-212ENST00000473961 KIR3DX1Q9H7L2 352 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 UBE2ZQ9H832 354 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-212ENST00000473961 MYOZ1Q9NP98 299 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-212ENST00000473961 C19orf12Q9NSK7 152 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 SCP2D1Q9UJQ7 156 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 KPTNQ9Y664 436 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 V9GYH0 126 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 MAST2Q6P0Q8 1798 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 NUP188Q5SRE5 1749 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 UBR2Q8IWV8 1755 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 IGHV3OR16-9A0A0B4J2B5 98 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 LOC100506127A0A0U1RQW1 187 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 A0A1W2PP18 115 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 C7orf66A4D0T2 115 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 F8VP50 259 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 LYRM1O43325 122 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 ERI3O43414 337 aaKnown RBP2.88□□□□□ -1.95
BRCA1-212ENST00000473961 CHP2O43745 196 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 HPGDSO60760 199 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 POP7O75817 140 aaKnown RBP2.88□□□□□ -1.95
BRCA1-212ENST00000473961 MPC2O95563 127 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 IGLV2-23P01705 113 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 APOC3P02656 99 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 TSPAN19P0C672 248 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 PVALBP20472 110 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-212ENST00000473961 HTR1DP28221 377 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 TGFBR1P36897 503 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 CFHR2P36980 270 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 RAB5BP61020 215 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 DYNLT1P63172 113 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 PRR3P79522 188 aaKnown RBP2.88□□□□□ -1.95
BRCA1-212ENST00000473961 EMX2Q04743 252 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 SMCO1Q147U7 214 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 MAD2L1BPQ15013 274 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-212ENST00000473961 TAF1AQ15573 450 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-212ENST00000473961 C2orf83Q53S99 150 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 PYDC2Q56P42 97 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 DNLZQ5SXM8 178 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 AVPI1Q5T686 147 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 HACD4Q5VWC8 232 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 TRIQKQ629K1 86 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 RPL13AP3Q6NVV1 102 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 DNAJC24Q6P3W2 148 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 HAGHLQ6PII5 290 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-212ENST00000473961 SLC16A13Q7RTY0 426 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 TAC4Q86UU9 113 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 COMTD1Q86VU5 262 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 FUNDC1Q8IVP5 155 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 CDKL3Q8IVW4 592 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-212ENST00000473961 PDZD9Q8IXQ8 264 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 MKXQ8IYA7 352 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 NPWQ8N729 165 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 CLDN22Q8N7P3 220 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 COX18Q8N8Q8 333 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 OR11H7Q8NGC8 314 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF461Q8TAF7 563 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF675Q8TD23 568 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 RGP1Q92546 391 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-212ENST00000473961 AP3S1Q92572 193 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 RNF185Q96GF1 192 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 NARS2Q96I59 477 aaKnown RBP2.88□□□□□ -1.95
BRCA1-212ENST00000473961 PPP1R36Q96LQ0 422 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 RBBP8Q99708 897 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 KCNS3Q9BQ31 491 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 MRPL57Q9BQC6 102 aaKnown RBP2.88□□□□□ -1.95
BRCA1-212ENST00000473961 C2orf88Q9BSF0 95 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms