RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 MMDQ15546 238 aa2□□□□□ -2.09
CLK1-209ENST00000472679 OR4K17Q8NGC6 315 aa2□□□□□ -2.09
CLK1-209ENST00000472679 KCTD4Q8WVF5 259 aa2□□□□□ -2.09
CLK1-209ENST00000472679 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2□□□□□ -2.09
CLK1-209ENST00000472679 PITX2Q99697 317 aa2□□□□□ -2.09
CLK1-209ENST00000472679 LRRC19Q9H756 370 aa2□□□□□ -2.09
CLK1-209ENST00000472679 CLEC2DQ9UHP7 191 aa2□□□□□ -2.09
CLK1-209ENST00000472679 HSPE1-MOB4S4R3N1 261 aa2□□□□□ -2.09
CLK1-209ENST00000472679 MGAT4DA6NG13 374 aa1.99□□□□□ -2.09
CLK1-209ENST00000472679 C17orf98A8MV24 154 aa1.99□□□□□ -2.09
CLK1-209ENST00000472679 EEF1E1O43324 174 aaKnown RBP1.99□□□□□ -2.09
CLK1-209ENST00000472679 SHOX2O60902 331 aaPredicted RBP1.99□□□□□ -2.09
CLK1-209ENST00000472679 SOX14O95416 240 aa1.99□□□□□ -2.09
CLK1-209ENST00000472679 TSPOP30536 169 aa1.99□□□□□ -2.09
CLK1-209ENST00000472679 DNASE1L1P49184 302 aa1.99□□□□□ -2.09
CLK1-209ENST00000472679 CARD18P57730 90 aa1.99□□□□□ -2.09
CLK1-209ENST00000472679 HBMQ6B0K9 141 aa1.99□□□□□ -2.09
CLK1-209ENST00000472679 CASTOR1Q8WTX7 329 aa1.99□□□□□ -2.09
CLK1-209ENST00000472679 HIST1H2BAQ96A08 127 aa1.99□□□□□ -2.09
CLK1-209ENST00000472679 LRRC39Q96DD0 335 aa1.99□□□□□ -2.09
CLK1-209ENST00000472679 ZNF286AQ9HBT8 521 aa1.99□□□□□ -2.09
CLK1-209ENST00000472679 KCNIP2Q9NS61 270 aa1.99□□□□□ -2.09
CLK1-209ENST00000472679 TBL2Q9Y4P3 447 aaKnown RBP1.99□□□□□ -2.09
CLK1-209ENST00000472679 ARAP3Q8WWN8 1544 aa1.98□□□□□ -2.09
CLK1-209ENST00000472679 KLRC4-KLRK1H3BQV0 150 aa1.98□□□□□ -2.09
CLK1-209ENST00000472679 CRTAPO75718 401 aaPredicted RBP1.98□□□□□ -2.09
CLK1-209ENST00000472679 RHOAP61586 193 aa1.98□□□□□ -2.09
CLK1-209ENST00000472679 PRDX1Q06830 199 aaKnown RBP1.98□□□□□ -2.09
CLK1-209ENST00000472679 APOFQ13790 326 aa1.98□□□□□ -2.09
CLK1-209ENST00000472679 VAMP3Q15836 100 aa1.98□□□□□ -2.09
CLK1-209ENST00000472679 CAVIN4Q5BKX8 364 aa1.98□□□□□ -2.09
CLK1-209ENST00000472679 Q6ZT83 130 aa1.98□□□□□ -2.09
CLK1-209ENST00000472679 FAM19A3Q7Z5A8 133 aa1.98□□□□□ -2.09
CLK1-209ENST00000472679 SLC25A45Q8N413 288 aa1.98□□□□□ -2.09
CLK1-209ENST00000472679 CIDECQ96AQ7 238 aaPredicted RBP1.98□□□□□ -2.09
CLK1-209ENST00000472679 ALX4Q9H161 411 aaPredicted RBP1.98□□□□□ -2.09
CLK1-209ENST00000472679 TMBIM4Q9HC24 238 aa1.98□□□□□ -2.09
CLK1-209ENST00000472679 RBMX2Q9Y388 322 aaKnown RBP1.98□□□□□ -2.09
CLK1-209ENST00000472679 CEP170Q5SW79 1584 aa1.98□□□□□ -2.09
CLK1-209ENST00000472679 TRAM1Q15629 374 aa1.97□□□□□ -2.09
CLK1-209ENST00000472679 SSX7Q7RTT5 188 aa1.97□□□□□ -2.09
CLK1-209ENST00000472679 NIT1Q86X76 327 aa1.97□□□□□ -2.09
CLK1-209ENST00000472679 OR4K13Q8NH42 304 aa1.97□□□□□ -2.09
CLK1-209ENST00000472679 OR5P2Q8WZ92 322 aa1.97□□□□□ -2.09
CLK1-209ENST00000472679 PRRG3Q9BZD7 231 aa1.97□□□□□ -2.09
CLK1-209ENST00000472679 FBXL15Q9H469 300 aa1.97□□□□□ -2.09
CLK1-209ENST00000472679 VPREB3Q9UKI3 123 aa1.97□□□□□ -2.09
CLK1-209ENST00000472679 CACNA1SQ13698 1873 aa1.97□□□□□ -2.09
CLK1-209ENST00000472679 ARGFXA6NJG6 315 aa1.96□□□□□ -2.1
CLK1-209ENST00000472679 FAM183AA6NL82 134 aa1.96□□□□□ -2.1
CLK1-209ENST00000472679 F5H5T6 163 aa1.96□□□□□ -2.1
CLK1-209ENST00000472679 TMEM250H0YL14 139 aa1.96□□□□□ -2.1
CLK1-209ENST00000472679 TP53I11O14683 189 aa1.96□□□□□ -2.1
CLK1-209ENST00000472679 CDIPTO14735 213 aa1.96□□□□□ -2.1
CLK1-209ENST00000472679 GTF2H1P32780 548 aa1.96□□□□□ -2.1
CLK1-209ENST00000472679 TRIP13Q15645 432 aaPredicted RBP1.96□□□□□ -2.1
CLK1-209ENST00000472679 DGAT2L6Q6ZPD8 337 aa1.96□□□□□ -2.1
CLK1-209ENST00000472679 OLIG3Q7RTU3 272 aa1.96□□□□□ -2.1
CLK1-209ENST00000472679 OR10P1Q8NGE3 313 aa1.96□□□□□ -2.1
CLK1-209ENST00000472679 GLT1D1Q96MS3 346 aa1.96□□□□□ -2.1
CLK1-209ENST00000472679 CCL26Q9Y258 94 aa1.96□□□□□ -2.1
CLK1-209ENST00000472679 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
CLK1-209ENST00000472679 TRPM3Q9HCF6 1732 aaPredicted RBP1.95□□□□□ -2.1
CLK1-209ENST00000472679 I3L4J1 428 aa1.95□□□□□ -2.1
CLK1-209ENST00000472679 SLC25A20O43772 301 aa1.95□□□□□ -2.1
CLK1-209ENST00000472679 SPNP16150 400 aa1.95□□□□□ -2.1
CLK1-209ENST00000472679 PYCR1P32322 319 aa1.95□□□□□ -2.1
CLK1-209ENST00000472679 PDCL2Q8N4E4 241 aa1.95□□□□□ -2.1
CLK1-209ENST00000472679 CLDN23Q96B33 292 aa1.95□□□□□ -2.1
CLK1-209ENST00000472679 AICDAQ9GZX7 198 aa1.95□□□□□ -2.1
CLK1-209ENST00000472679 IFT46Q9NQC8 304 aa1.95□□□□□ -2.1
CLK1-209ENST00000472679 NXT1Q9UKK6 140 aaKnown RBP1.95□□□□□ -2.1
CLK1-209ENST00000472679 ADGRB3O60242 1522 aa1.95□□□□□ -2.1
CLK1-209ENST00000472679 ADAMTS7Q9UKP4 1686 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 IGKV1-12A0A0C4DH73 117 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 IGKV1D-12P01611 117 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 CRABP1P29762 137 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 CBX5P45973 191 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 SPIN4Q56A73 249 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 LAMTOR1Q6IAA8 161 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 FAM183BPQ6ZVS7 135 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 DNAAF3Q8N9W5 541 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 SPPL2BQ8TCT7 592 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 PDCD6IPQ8WUM4 868 aaKnown RBP1.94□□□□□ -2.1
CLK1-209ENST00000472679 TAPBPLQ9BX59 468 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 POTEKPQ9BYX7 375 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 TAS2R13Q9NYV9 303 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 TAS2R9Q9NYW1 312 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 OR51B4Q9Y5P0 310 aa1.94□□□□□ -2.1
CLK1-209ENST00000472679 CRB1P82279 1406 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 COL18A1P39060 1754 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 OTOFQ9HC10 1997 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 A0A1B0GW15 77 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 RAB19A4D1S5 217 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 C8orf87E5RJ46 101 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 FGF16O43320 207 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 ZNF189O75820 626 aaPredicted RBP1.93□□□□□ -2.1
CLK1-209ENST00000472679 CCNOP22674 350 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 MAGEA3P43357 314 aa1.93□□□□□ -2.1
CLK1-209ENST00000472679 AQP5P55064 265 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms