RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 PTX4Q96A99 478 aa12.37□□□□□ -0.43
SNX13-205ENST00000471744 SLC6A7Q99884 636 aa12.37□□□□□ -0.43
SNX13-205ENST00000471744 CENPOQ9BU64 300 aa12.37□□□□□ -0.43
SNX13-205ENST00000471744 RAB9BQ9NP90 201 aa12.37□□□□□ -0.43
SNX13-205ENST00000471744 ING3Q9NXR8 418 aa12.37□□□□□ -0.43
SNX13-205ENST00000471744 ETAA1Q9NY74 926 aa12.37□□□□□ -0.43
SNX13-205ENST00000471744 SESN1Q9Y6P5 492 aa12.37□□□□□ -0.43
SNX13-205ENST00000471744 LDLRAD4O15165 306 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 RAB6AP20340 208 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 GZMHP20718 246 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 CHATP28329 748 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 GLP1RP43220 463 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 SCAND1P57086 179 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 MIDNQ504T8 468 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 SIGIRRQ6IA17 410 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 HEPN1Q6WQI6 88 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 BRD3OSQ6XYD6 125 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 ZNF497Q6ZNH5 498 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 CROCCP3Q8IVE0 287 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 FAM89BQ8N5H3 189 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 OR56B1Q8NGI3 324 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 FUNDC2Q9BWH2 189 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 LPAR5Q9H1C0 372 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 LIN7BQ9HAP6 207 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 ZNF581Q9P0T4 197 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 ATRQ13535 2644 aa12.36□□□□□ -0.43
SNX13-205ENST00000471744 SVEP1Q4LDE5 3571 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 TMEM272A0A1B0GTI8 110 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 KBTBD11-OT1A0A1B0GTJ5 212 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 NPFFO15130 113 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 BLVRBP30043 206 aaPredicted RBP12.35□□□□□ -0.43
SNX13-205ENST00000471744 HILS1P60008 231 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 KLRD1Q13241 179 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 NKAPLQ5M9Q1 402 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 RUSC1-AS1Q66K80 236 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 SFXN4Q6P4A7 337 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 TRAT1Q6PIZ9 186 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 NR2C2APQ86WQ0 139 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 OR10A7Q8NGE5 316 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 C22orf15Q8WYQ4 148 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 KCNK15Q9H427 330 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 PRDM13Q9H4Q3 707 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 LINC00574Q9H8X3 128 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 PLEKHJ1Q9NW61 149 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 HSF4Q9ULV5 492 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 FAM96BQ9Y3D0 163 aa12.35□□□□□ -0.43
SNX13-205ENST00000471744 MEX3AA1L020 520 aaKnown RBP12.34□□□□□ -0.43
SNX13-205ENST00000471744 METTL21EPA6NDL7 271 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 MT-ND4P03905 459 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 CGB3P0DN86 165 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 CGB7P0DN87 165 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 CDK2P24941 298 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 LGALS4P56470 323 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 MXD1Q05195 221 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 C6orf183Q5T699 404 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 HCP5Q6MZN7 132 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 BRICD5Q6PL45 260 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 ZNF782Q6ZMW2 699 aaPredicted RBP12.34□□□□□ -0.43
SNX13-205ENST00000471744 GPR141Q7Z602 305 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 RTN4RL2Q86UN3 420 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 PDZD9Q8IXQ8 264 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 BCL6BQ8N143 479 aaPredicted RBP12.34□□□□□ -0.43
SNX13-205ENST00000471744 GAPTQ8N292 157 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 PNKDQ8N490 385 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 OR11H6Q8NGC7 330 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 OR13A1Q8NGR1 328 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 NICN1Q9BSH3 213 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 TMEM133Q9H2Q1 129 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 RNF167Q9H6Y7 350 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 ZMAT3Q9HA38 289 aaKnown RBP12.34□□□□□ -0.43
SNX13-205ENST00000471744 CALYQ9NYX4 217 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 DAPK2Q9UIK4 370 aa12.34□□□□□ -0.43
SNX13-205ENST00000471744 UBE2QL1A1L167 161 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 SMIM30A4D0T7 59 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 ORC5O43913 435 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 SCGNO76038 276 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 IL1AP01583 271 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 FBP1P09467 338 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 COX7A1P24310 79 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 SAA4P35542 130 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 ALDH3B2P48448 385 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 C17orf58Q2M2W7 97 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 TMEM30BQ3MIR4 351 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 ZNF554Q86TJ5 538 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 ANKRD13BQ86YJ7 626 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 SIGLECL1Q8N7X8 197 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 MRGPRDQ8TDS7 321 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 ZFAND2BQ8WV99 257 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 CLEC7AQ9BXN2 247 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 RIMS4Q9H426 269 aaPredicted RBP12.33□□□□□ -0.44
SNX13-205ENST00000471744 TRAPPC2LQ9UL33 140 aa12.33□□□□□ -0.44
SNX13-205ENST00000471744 TBL2Q9Y4P3 447 aaKnown RBP12.33□□□□□ -0.44
SNX13-205ENST00000471744 A0A0A6YYD4 124 aa12.32□□□□□ -0.44
SNX13-205ENST00000471744 MEIOCA2RUB1 952 aa12.32□□□□□ -0.44
SNX13-205ENST00000471744 POM121CA8CG34 1229 aa12.32□□□□□ -0.44
SNX13-205ENST00000471744 NPIPB11E5RHQ5 1161 aa12.32□□□□□ -0.44
SNX13-205ENST00000471744 PAHP00439 452 aa12.32□□□□□ -0.44
SNX13-205ENST00000471744 TFAP2AP05549 437 aa12.32□□□□□ -0.44
SNX13-205ENST00000471744 SLC2A2P11168 524 aaPredicted RBP12.32□□□□□ -0.44
SNX13-205ENST00000471744 CD34P28906 385 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms