RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 CD36P16671 472 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 SPAM1P38567 509 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 PLTPP55058 493 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 SSX7Q7RTT5 188 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 CYP4Z1Q86W10 505 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 OR4X2Q8NGF9 303 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 SLC25A31Q9H0C2 315 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 C16orf95Q9H693 158 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 XKR8Q9H6D3 395 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 VCX3AQ9NNX9 186 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 DDX18Q9NVP1 670 aaKnown RBP0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 MRPS16Q9Y3D3 137 aaKnown RBP0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 KDM5BQ9UGL1 1544 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 PHLPP2Q6ZVD8 1323 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 SERTM2A0A1B0GWG4 89 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 A0A1W2PRF3 423 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 A0A1W2PRM7 423 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 A8MUN3 132 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 SUPT3HB4E1H0 165 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 J3QQQ9 107 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 IGKV5-2P06315 115 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 ZNF705DP0CH99 300 aaPredicted RBP0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 ZNF705BP0CI00 300 aaPredicted RBP0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 TUBG1P23258 451 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 PSMD4P55036 377 aaKnown RBP0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 RAB25P57735 213 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 RPL26P61254 145 aaKnown RBP0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 DYNC1I2Q13409 638 aaKnown RBP0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 IL18Q14116 193 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 ATP6V1FQ16864 119 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 GOLGA7BQ2TAP0 167 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 DUPD1Q68J44 220 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 C2orf91Q6ZV80 131 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 ATPAF2Q8N5M1 289 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 ZIC4Q8N9L1 334 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 ZNRF2Q8NHG8 242 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 TUBG2Q9NRH3 451 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 PRO2289Q9P1D8 64 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 RPL26L1Q9UNX3 145 aaKnown RBP0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 ANGPT4Q9Y264 503 aa0.25□□□□□ -2.37
PRPF40A-207ENST00000471701 IGHV2-26A0A0B4J1V2 119 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 CCDC169A6NNP5 214 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 TCF21O43680 179 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 ZNF3P17036 446 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 IVDP26440 423 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 CSKP41240 450 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 HINT1P49773 126 aaPredicted RBP0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 TAS2R60P59551 318 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 C2orf80Q0P641 193 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 ZBTB6Q15916 424 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 PLCXD3Q63HM9 321 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 CLEC2AQ6UVW9 174 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 SLC35D2Q76EJ3 337 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 CLHC1Q8NHS4 586 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 SPPL2BQ8TCT7 592 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 BEX2Q9BXY8 128 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 PECRQ9BY49 303 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 EXO5Q9H790 373 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 RHBDD3Q9Y3P4 386 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 MTCH2Q9Y6C9 303 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 USH1CQ9Y6N9 552 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 SLX4Q8IY92 1834 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 ATAD5Q96QE3 1844 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 ADAMTSL1Q8N6G6 1762 aa0.24□□□□□ -2.37
PRPF40A-207ENST00000471701 PLCH2O75038 1416 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 PTPRJQ12913 1337 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 TRAV8-7A0A075B6U6 113 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 ANKRD20A5PA0PJZ0 165 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 CENPXA8MT69 81 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 TOR1AO14656 332 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 HCRTO43612 131 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 NDUFAF6Q330K2 333 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 KRTAP21-1Q3LI58 79 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 ULK3Q6PHR2 472 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 CLEC20AQ6ZU45 233 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 CA13Q8N1Q1 262 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 PROKR2Q8NFJ6 384 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 SUN5Q8TC36 379 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 CLDN23Q96B33 292 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 POTEKPQ9BYX7 375 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 CYSTM1Q9H1C7 97 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 POMPQ9Y244 141 aa0.23□□□□□ -2.37
PRPF40A-207ENST00000471701 NSD2O96028 1365 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 TNIKQ9UKE5 1360 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 IGHV3OR15-7A0A075B7D8 119 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 LOC100653049A0A140TA62 436 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 RNASEK-C17orf49H0YIS7 233 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 J3QLI3 93 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 KRT34O76011 436 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 CA2P00918 260 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 OR4A8P0C604 315 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 IL9P15248 144 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 PRKACAP17612 351 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 CCT6AP40227 531 aaKnown RBP0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 GPR4P46093 362 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 DEFA6Q01524 100 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 SKP2Q13309 424 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 RAB11BQ15907 218 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 UAP1Q16222 522 aaPredicted RBP0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 FAM19A3Q7Z5A8 133 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms