RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 GABRA6Q16445 453 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 MRPL23Q16540 153 aaKnown RBP3.99□□□□□ -1.77
CKS1B-204ENST00000471245 TMEM176BQ3YBM2 270 aaPredicted RBP3.99□□□□□ -1.77
CKS1B-204ENST00000471245 C9orf129Q5T035 196 aaKnown RBP3.99□□□□□ -1.77
CKS1B-204ENST00000471245 ZCCHC24Q8N2G6 241 aaKnown RBP3.99□□□□□ -1.77
CKS1B-204ENST00000471245 ZNF786Q8N393 782 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 WDR31Q8NA23 367 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 CLDND2Q8NHS1 167 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 CDC26Q8NHZ8 85 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 PLPPR1Q8TBJ4 325 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 GPR119Q8TDV5 335 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 C7orf33Q8WU49 177 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 RAB1CQ92928 201 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 TMIGD2Q96BF3 282 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 NAPGQ99747 312 aaPredicted RBP3.99□□□□□ -1.77
CKS1B-204ENST00000471245 MRPL57Q9BQC6 102 aaKnown RBP3.99□□□□□ -1.77
CKS1B-204ENST00000471245 GIN1Q9NXP7 522 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 TMEM216Q9P0N5 145 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 NUP50Q9UKX7 468 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 PYCARDQ9ULZ3 195 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 POLR3HQ9Y535 204 aaPredicted RBP3.99□□□□□ -1.77
CKS1B-204ENST00000471245 KCNE3Q9Y6H6 103 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 COL7A1Q02388 2944 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 KBTBD11-OT1A0A1B0GTJ5 212 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 A0A1W2PQD3 144 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 TRIM49D1C9J1S8 452 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 LYNX1G3V0Z9 82 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 SUPT7LO94864 414 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 TSPAN13O95857 204 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 SERPINE2P07093 398 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 IFI6P09912 130 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 LYNX1P0DP58 116 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 PRPS2P11908 318 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 ATP6V1B2P21281 511 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 ELK4P28324 431 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 SELENOTP62341 195 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 ZNF763Q0D2J5 394 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 SPIN4Q56A73 249 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 C1orf100Q5SVJ3 147 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 FBXW9Q5XUX1 488 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 NOXRED1Q6NXP6 359 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 OLIG3Q7RTU3 272 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 C6orf223Q8N319 242 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 FNDC5Q8NAU1 212 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 ATP6V1C2Q8NEY4 427 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 OR9G4Q8NGQ1 327 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 ZFP90Q8TF47 636 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 C22orf15Q8WYQ4 148 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 ITCHQ96J02 903 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 FCRL1Q96LA6 429 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 MFFQ9GZY8 342 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 RAB1BQ9H0U4 201 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 TMEM165Q9HC07 324 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 CA10Q9NS85 328 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 MTCH1Q9NZJ7 389 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 CLN8Q9UBY8 286 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 STK38LQ9Y2H1 464 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 MMP24Q9Y5R2 645 aa3.98□□□□□ -1.77
CKS1B-204ENST00000471245 TRBV9A0A0B4J1U6 114 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 A6NIZ1 184 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 GJE1A6NN92 205 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 NPPAP01160 153 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 C1QCP02747 245 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 OR4A8P0C604 315 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 MDKP21741 143 aaPredicted RBP3.97□□□□□ -1.77
CKS1B-204ENST00000471245 PRTN3P24158 256 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 HMOX2P30519 316 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 IFNA8P32881 189 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 GLP1RP43220 463 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 PSMD4P55036 377 aaKnown RBP3.97□□□□□ -1.77
CKS1B-204ENST00000471245 RAP1BP61224 184 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 CAV1Q03135 178 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 ZNHIT3Q15649 155 aaPredicted RBP3.97□□□□□ -1.77
CKS1B-204ENST00000471245 LY6G6FQ5SQ64 297 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 C9orf135Q5VTT2 229 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 Q6ZN92 141 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 CEND1Q8N111 149 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 TEX29Q8N6K0 151 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 SIGLECL1Q8N7X8 197 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 C8orf31Q8N9H6 132 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 CDRT4Q8N9R6 151 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 OR52E4Q8NGH9 312 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 OR51F2Q8NH61 342 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 CLHC1Q8NHS4 586 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 CDS1Q92903 461 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 LRRC58Q96CX6 371 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 L3HYPDHQ96EM0 354 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 ARL5BQ96KC2 179 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 MAGEB18Q96M61 343 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 DOK1Q99704 481 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 RANBP3Q9H6Z4 567 aaPredicted RBP3.97□□□□□ -1.77
CKS1B-204ENST00000471245 NTN4Q9HB63 628 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 UBQLN4Q9NRR5 601 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 PLXNB1O43157 2135 aa3.97□□□□□ -1.77
CKS1B-204ENST00000471245 TANC2Q9HCD6 1990 aa3.96□□□□□ -1.77
CKS1B-204ENST00000471245 IGHV1-18A0A0C4DH31 117 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 LOC100506127A0A0U1RQW1 187 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 A0A1W2PPV4 95 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 hCG_2039718K7EN88 272 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 ALDOBP05062 364 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms