RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ZNF586Q9NXT0 402 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 HMGXB4Q9UGU5 601 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 ATP6V1DQ9Y5K8 247 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 TICRRQ7Z2Z1 1910 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 KIAA0232Q92628 1395 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 OR6C70A6NIJ9 312 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 ARGFXA6NJG6 315 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 ZNF729A6NN14 1252 aaPredicted RBP2.26□□□□□ -2.05
VPS13A-209ENST00000467124 A8MWP4 228 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 IGHG2P01859 326 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 CGB3P0DN86 165 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 CGB7P0DN87 165 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 EVI2BP34910 448 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 STC1P52823 247 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 EXOC3L4Q17RC7 722 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 ZNF660Q6AZW8 331 aaPredicted RBP2.26□□□□□ -2.05
VPS13A-209ENST00000467124 CLEC6AQ6EIG7 209 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 TTC33Q6PID6 262 aaPredicted RBP2.26□□□□□ -2.05
VPS13A-209ENST00000467124 ZNF680Q8NEM1 530 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 LFNGQ8NES3 379 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 PRSS27Q9BQR3 290 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 EBPLQ9BY08 206 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 COMMD9Q9P000 198 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 ZNF492Q9P255 531 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 PUS1Q9Y606 427 aaKnown RBP eCLIP2.26□□□□□ -2.05
VPS13A-209ENST00000467124 PLXNB3Q9ULL4 1909 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 SCN4AP35499 1836 aa2.26□□□□□ -2.05
VPS13A-209ENST00000467124 USP42Q9H9J4 1324 aaKnown RBP2.25□□□□□ -2.05
VPS13A-209ENST00000467124 GOLGA6L10A6NI86 522 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 KLRC4-KLRK1H3BQV0 150 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 TOX3O15405 576 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-209ENST00000467124 ATP8B1O43520 1251 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 TCF21O43680 179 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 ORM1P02763 201 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 MLNP12872 115 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 HSPA13P48723 471 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 MAP3K7CLP57077 242 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 RPS11P62280 158 aaKnown RBP eCLIP2.25□□□□□ -2.05
VPS13A-209ENST00000467124 SMAGPQ0VAQ4 97 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 ENDOGQ14249 297 aaKnown RBP2.25□□□□□ -2.05
VPS13A-209ENST00000467124 DNAL1Q4LDG9 190 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 MRPL2Q5T653 305 aaKnown RBP2.25□□□□□ -2.05
VPS13A-209ENST00000467124 PRR9Q5T870 116 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 DOLPP1Q86YN1 238 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 PLCZ1Q86YW0 608 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 MUC15Q8N387 334 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 SLC25A45Q8N413 288 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 OR4P4Q8NGL7 312 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 OR2V2Q96R30 315 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 TSGA10Q9BZW7 698 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 DRC3Q9H069 523 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 WDR54Q9H977 334 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 KCNIP2Q9NS61 270 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 IMP3Q9NV31 184 aaKnown RBP2.25□□□□□ -2.05
VPS13A-209ENST00000467124 V9GYY5 206 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-209ENST00000467124 TRIP11Q15643 1979 aa2.25□□□□□ -2.05
VPS13A-209ENST00000467124 RAB3GAP2Q9H2M9 1393 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 THADAQ6YHU6 1953 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 IGHV1-45A0A0A0MS14 117 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 IGHV3-21A0A0B4J1V1 117 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 IGHV3-43A0A0B4J1X8 118 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 A0A1B0GTI1 187 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 CBR3O75828 277 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 IGHMP01871 453 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 CD5P06127 495 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 OCMP0CE72 109 aaPredicted RBP2.24□□□□□ -2.05
VPS13A-209ENST00000467124 F8A1P23610 371 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 CD34P28906 385 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 SLC9A3R2Q15599 337 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 C4orf26Q17RF5 130 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 PDZD11Q5EBL8 140 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 FAM162BQ5T6X4 162 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 TMEM215Q68D42 235 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 SPNS3Q6ZMD2 512 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 CYHR1Q6ZMK1 362 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 SPATA24Q86W54 205 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 ACBD4Q8NC06 268 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 OR5D18Q8NGL1 313 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 PPWD1Q96BP3 646 aaKnown RBP2.24□□□□□ -2.05
VPS13A-209ENST00000467124 TMEM208Q9BTX3 173 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 BAZ1BQ9UIG0 1483 aaKnown RBP2.24□□□□□ -2.05
VPS13A-209ENST00000467124 NOS1P29475 1434 aa2.24□□□□□ -2.05
VPS13A-209ENST00000467124 TMEM213A2RRL7 107 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 OR5H14A6NHG9 310 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 METTL15A6NJ78 407 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 LEUTXA8MZ59 168 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 F5H5K5 113 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 K7EQS6 105 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 ITGB1BP1O14713 200 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 CYTH3O43739 400 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 KLHL2O95198 593 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 FSTL3O95633 263 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 ELK4P28324 431 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 CRABP2P29373 138 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 SKP2Q13309 424 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 CENPWQ5EE01 88 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 HES3Q5TGS1 186 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 FAM45BPQ6NSW5 357 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms