RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 H0YHG0 523 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 CDK1P06493 297 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 GZMHP20718 246 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 PAX6P26367 422 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 HSPA13P48723 471 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 RAB13P51153 203 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 EFNB2P52799 333 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 RPS11P62280 158 aaKnown RBP eCLIP10.57□□□□□ -0.72
HDAC1-203ENST00000463172 SRSF4Q08170 494 aaKnown RBP10.57□□□□□ -0.72
HDAC1-203ENST00000463172 C6orf141Q5SZD1 244 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 ATAD3CQ5T2N8 411 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 AWAT2Q6E213 333 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 SLC16A12Q6ZSM3 486 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 DYNAPQ8N1N2 210 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 OR4P4Q8NGL7 312 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 PIFOQ8TCI5 191 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 UQCC2Q9BRT2 126 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 PPIL3Q9H2H8 161 aaKnown RBP10.57□□□□□ -0.72
HDAC1-203ENST00000463172 FKBP14Q9NWM8 211 aa10.57□□□□□ -0.72
HDAC1-203ENST00000463172 MCRIP1C9JLW8 97 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 GEMIN2O14893 280 aaKnown RBP10.56□□□□□ -0.72
HDAC1-203ENST00000463172 MMP23AO75900 390 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 IL1AP01583 271 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 MAS1P04201 325 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 HLA-DRB5Q30154 266 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 RSBN1Q5VWQ0 802 aaPredicted RBP10.56□□□□□ -0.72
HDAC1-203ENST00000463172 GLIPR1L1Q6UWM5 242 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 TMEM219Q86XT9 240 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 KLHDC1Q8N7A1 406 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 MUL1Q969V5 352 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 RPEQ96AT9 228 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 DERL3Q96Q80 235 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 CST11Q9H112 138 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 MMP28Q9H239 520 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 ZNF286AQ9HBT8 521 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 IDI2-AS1Q9NZ38 188 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 GHRLQ9UBU3 117 aa10.56□□□□□ -0.72
HDAC1-203ENST00000463172 TRAV8-7A0A075B6U6 113 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 A0A1W2PPK0 400 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM90A10PA6NDY2 464 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM90A18PA6NE21 464 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM90A16PA6NEW6 464 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM90A20PA6NIJ5 464 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM90A7PA6NKC0 464 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM90A22PA8MWA6 464 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM90A12PA8MX19 464 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM90A5PA8MXJ8 464 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM90A23PA8MXZ1 464 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 BUB1B-PAK6H3BSN5 160 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 M0QZK8 103 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 CHST1O43916 411 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 IGLV1-47P01700 117 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 CSF1P09603 554 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM90A15PP0C7V4 464 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM90A13PP0C7W8 464 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM90A14PP0C7W9 464 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM90A24PP0C7X0 464 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 UBBP0CG47 229 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 VSIG10L2P0DP72 767 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 RANBP1P43487 201 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 AQP4P55087 323 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 GPR50Q13585 617 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 SPHARQ15513 63 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 MED22Q15528 200 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 C17orf58Q2M2W7 97 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 GLT8D1Q68CQ7 371 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 LAIR2Q6ISS4 152 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 OR13A1Q8NGR1 328 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 MRGPRDQ8TDS7 321 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 UFD1Q92890 307 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 TOMM40LQ969M1 308 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 ORAI1Q96D31 301 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 KIRREL1Q96J84 757 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 LINC00574Q9H8X3 128 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 LIN7BQ9HAP6 207 aa10.55□□□□□ -0.72
HDAC1-203ENST00000463172 NKX1-2Q9UD57 310 aaPredicted RBP10.55□□□□□ -0.72
HDAC1-203ENST00000463172 FAM172BPA6NC97 362 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 CA11O75493 328 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 CRTAPO75718 401 aaPredicted RBP10.54□□□□□ -0.72
HDAC1-203ENST00000463172 LPLP06858 475 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 FAM106CPP0CH98 169 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 KRTAP10-3P60369 221 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 MADCAM1Q13477 382 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 TRAM1Q15629 374 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 TMEM30BQ3MIR4 351 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 ACSM3Q53FZ2 586 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 C6orf183Q5T699 404 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 TPTE2P1Q5T6R2 138 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 TRAT1Q6PIZ9 186 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 Q8N2B8 174 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 OR10X1Q8NGY0 326 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 PLPPR1Q8TBJ4 325 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 PHYHIPQ92561 330 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 BLOC1S6Q9UL45 172 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 SIGLEC9Q9Y336 463 aa10.54□□□□□ -0.72
HDAC1-203ENST00000463172 NPIPB11E5RHQ5 1161 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 J3QR06 171 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 AIPO00170 330 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 SPINT2O43291 252 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 RGS10O43665 173 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms