RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 SSTR5P35346 364 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 GNG10P50151 68 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 GP2P55259 537 aaKnown RBP15.12■□□□□ 0.01
USP39-209ENST00000458268 SRSF4Q08170 494 aaKnown RBP15.12■□□□□ 0.01
USP39-209ENST00000458268 MLLT11Q13015 90 aaPredicted RBP15.12■□□□□ 0.01
USP39-209ENST00000458268 C17orf58Q2M2W7 97 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 MPV17LQ2QL34 196 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 NKAPLQ5M9Q1 402 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 OLFML2AQ68BL7 652 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 OR10K2Q6IF99 312 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 LINC00596Q86U02 117 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 LRRTM1Q86UE6 522 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 TMEM219Q86XT9 240 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 ZNF565Q8N9K5 539 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 TMEM104Q8NE00 496 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 RNF114Q9Y508 228 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 KBTBD11-OT1A0A1B0GTJ5 212 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 UBE2QL1A1L167 161 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 CLPSL1A2RUU4 121 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 MCRIP1C9JLW8 97 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 NDUFA7O95182 113 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 SRMP19623 302 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 KCNJ3P48549 501 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 TPBGQ13641 420 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 NHLRC3Q5JS37 347 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 UTF1Q5T230 341 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 RAB12Q6IQ22 244 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 SHISA2Q6UWI4 295 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 ZNF367Q7RTV3 350 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 CDH26Q8IXH8 852 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 MALSU1Q96EH3 234 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 UQCC2Q9BRT2 126 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 PLGRKTQ9HBL7 147 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 ETAA1Q9NY74 926 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 IDI2-AS1Q9NZ38 188 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 PEX16Q9Y5Y5 336 aa15.11■□□□□ 0.01
USP39-209ENST00000458268 FAM90A8PA6NJQ4 464 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 AIPO00170 330 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 IL1AP01583 271 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 UCHL1P09936 223 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 CPEP16870 476 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 CALRP27797 417 aaKnown RBP15.1■□□□□ 0.01
USP39-209ENST00000458268 RPL15P61313 204 aaKnown RBP15.1■□□□□ 0.01
USP39-209ENST00000458268 P2RY14Q15391 338 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 TBCEQ15813 527 aaPredicted RBP15.1■□□□□ 0.01
USP39-209ENST00000458268 OR4P4Q8NGL7 312 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 OR4K15Q8NH41 348 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 LINC01006Q8NI28 216 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 ZNF596Q8TC21 504 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 PHYHIPQ92561 330 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 KIRREL1Q96J84 757 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 CST11Q9H112 138 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 ISYNA1Q9NPH2 558 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 SIGLEC9Q9Y336 463 aa15.1■□□□□ 0.01
USP39-209ENST00000458268 AK6Q9Y3D8 172 aaKnown RBP15.1■□□□□ 0.01
USP39-209ENST00000458268 A0A1B0GUS0 222 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 A0A1W2PPE3 182 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 POM121CA8CG34 1229 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 CHST1O43916 411 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 CD24P25063 80 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 HTR2CP28335 458 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 PRRX1P54821 245 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 FABP5Q01469 135 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 TRAM1Q15629 374 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 ARSJQ5FYB0 599 aaPredicted RBP15.09■□□□□ 0.01
USP39-209ENST00000458268 MINOS1Q5TGZ0 78 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 SLC35E4Q6ICL7 350 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 TMEM91Q6ZNR0 172 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 RTN4RL2Q86UN3 420 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 PRR18Q8N4B5 295 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 OR4C13Q8NGP0 309 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 ARL11Q969Q4 196 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 CYYR1Q96J86 154 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 SPACA1Q9HBV2 294 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 ACOT13Q9NPJ3 140 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 DPM3Q9P2X0 92 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 TRAPPC2LQ9UL33 140 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 MINOS1-NBL1R4GNA1 71 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 ANK2Q01484 3957 aa15.09■□□□□ 0.01
USP39-209ENST00000458268 IGHV3-43A0A0B4J1X8 118 aa15.08■□□□□ 0
USP39-209ENST00000458268 ARL6IP5O75915 188 aa15.08■□□□□ 0
USP39-209ENST00000458268 IGHV3-43DP0DP04 118 aa15.08■□□□□ 0
USP39-209ENST00000458268 PSMA1P25786 263 aaKnown RBP15.08■□□□□ 0
USP39-209ENST00000458268 PSMB9P28065 219 aa15.08■□□□□ 0
USP39-209ENST00000458268 GABRA5P31644 462 aa15.08■□□□□ 0
USP39-209ENST00000458268 GABARAPL2P60520 117 aa15.08■□□□□ 0
USP39-209ENST00000458268 SVOPQ8N4V2 548 aa15.08■□□□□ 0
USP39-209ENST00000458268 WFDC12Q8WWY7 111 aa15.08■□□□□ 0
USP39-209ENST00000458268 MRPS24Q96EL2 167 aaKnown RBP15.08■□□□□ 0
USP39-209ENST00000458268 Q96M66 194 aa15.08■□□□□ 0
USP39-209ENST00000458268 TMEM59Q9BXS4 323 aa15.08■□□□□ 0
USP39-209ENST00000458268 IFT22Q9H7X7 185 aa15.08■□□□□ 0
USP39-209ENST00000458268 RAB18Q9NP72 206 aa15.08■□□□□ 0
USP39-209ENST00000458268 TCF19Q9Y242 345 aa15.08■□□□□ 0
USP39-209ENST00000458268 MMP24Q9Y5R2 645 aa15.08■□□□□ 0
USP39-209ENST00000458268 LEUTXA8MZ59 168 aa15.07■□□□□ 0
USP39-209ENST00000458268 SC5DO75845 299 aa15.07■□□□□ 0
USP39-209ENST00000458268 UBBP0CG47 229 aa15.07■□□□□ 0
USP39-209ENST00000458268 EMX1Q04741 257 aaPredicted RBP15.07■□□□□ 0
USP39-209ENST00000458268 AANATQ16613 207 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms