RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 TCTEX1D2Q8WW35 142 aa16.8■□□□□ 0.28
CNEP1R1-203ENST00000458059 SMOC1Q9H4F8 434 aa16.8■□□□□ 0.28
CNEP1R1-203ENST00000458059 GNG13Q9P2W3 67 aa16.8■□□□□ 0.28
CNEP1R1-203ENST00000458059 METTL1Q9UBP6 276 aaKnown RBP16.8■□□□□ 0.28
CNEP1R1-203ENST00000458059 ZNF732B4DXR9 585 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 IGHV2-5P01817 119 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 IAPPP10997 89 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 MLF1P58340 268 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 RHEBQ15382 184 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 EXT1Q16394 746 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 AKR1C8PQ5T2L2 129 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 ZNF429Q86V71 674 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 COMMD1Q8N668 190 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 CPT1CQ8TCG5 803 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 RSG1Q9BU20 258 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 PLEKHF2Q9H8W4 249 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 MED12LQ86YW9 2145 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 IGKV1-6A0A0C4DH72 117 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 ARGFXA6NJG6 315 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 CELA3AP09093 270 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 LPAL2Q16609 132 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 GFI1BQ5VTD9 330 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 LCN15Q6UWW0 184 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 TDHQ8IZJ6 230 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 IL22RA1Q8N6P7 574 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 Q8WTZ3 238 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 EDARADDQ8WWZ3 215 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 INTS12Q96CB8 462 aaKnown RBP16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 TAAR9Q96RI9 348 aa16.79■□□□□ 0.28
CNEP1R1-203ENST00000458059 LOC102723996A0A087X1L8 192 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 ZNF503-AS2A6NEH8 195 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 LILRA1O75019 489 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 EIF2S3P41091 472 aaKnown RBP16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 FOLR3P41439 243 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 RAB5CP51148 216 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 UCP2P55851 309 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 RPL23AP62750 156 aaKnown RBP16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 S100A12P80511 92 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 ARF1P84077 181 aaKnown RBP16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 Q0VFX4 171 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 EIF3IQ13347 325 aaKnown RBP16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 Q6ZSR3 168 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 CMTM1Q8IZ96 169 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 A0A1W2PR80 420 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 ERVFRD-1P60508 538 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 MPV17LQ2QL34 196 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 TMEM211Q6ICI0 200 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 HES7Q9BYE0 225 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 PRRG4Q9BZD6 226 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 ZNF552Q9H707 407 aaPredicted RBP16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 LYRM2Q9NU23 88 aaPredicted RBP16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 MTCH1Q9NZJ7 389 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 WSB1Q9Y6I7 421 aa16.78■□□□□ 0.28
CNEP1R1-203ENST00000458059 GJE1A6NN92 205 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 IFNA17P01571 189 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 PAX6P26367 422 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 C3AR1Q16581 482 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 ASCL4Q6XD76 172 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 OR2V1Q8NHB1 315 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 MAFAQ8NHW3 353 aaPredicted RBP16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 RPL36A-HNRNPH2H7BZ11 118 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 CYB5BO43169 146 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 HSPA12AO43301 675 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 CNOT4O95628 575 aaKnown RBP16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 RAB11AP62491 216 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 SPATA46Q5T0L3 261 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 OR1K1Q8NGR3 316 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 OR2Y1Q8NGV0 311 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 VSIRQ9H7M9 311 aa16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 SEBOXQ9HB31 216 aaPredicted RBP16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 NOSIPQ9Y314 301 aaKnown RBP16.77■□□□□ 0.28
CNEP1R1-203ENST00000458059 MAP1BP46821 2468 aaKnown RBP16.77■□□□□ 0.27
CNEP1R1-203ENST00000458059 SRP19P09132 144 aaKnown RBP16.77■□□□□ 0.27
CNEP1R1-203ENST00000458059 FGF5P12034 268 aa16.77■□□□□ 0.27
CNEP1R1-203ENST00000458059 HEPN1Q6WQI6 88 aa16.77■□□□□ 0.27
CNEP1R1-203ENST00000458059 MRPL21Q7Z2W9 205 aaKnown RBP16.77■□□□□ 0.27
CNEP1R1-203ENST00000458059 WDR54Q9H977 334 aa16.77■□□□□ 0.27
CNEP1R1-203ENST00000458059 HMGB3O15347 200 aaKnown RBP16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 PITX3O75364 302 aa16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 MRPL33O75394 65 aaKnown RBP16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 CDS2O95674 445 aa16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 ICAM4Q14773 271 aa16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 OR8B8Q15620 311 aa16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 SPNS3Q6ZMD2 512 aa16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 MUCL1Q96DR8 90 aa16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 Q9N2K0 584 aa16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 USF3Q68DE3 2245 aa16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 MED13Q9UHV7 2174 aa16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 LRRC3CA6NJW4 275 aa16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 RPS16P62249 146 aaKnown RBP16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 SF3B5Q9BWJ5 86 aaKnown RBP16.76■□□□□ 0.27
CNEP1R1-203ENST00000458059 SCAF4O95104 1147 aaKnown RBP16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 PSG2P11465 335 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 SRD5A2P31213 254 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 UCP3P55916 312 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 LFNGQ8NES3 379 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 SIGLEC12Q96PQ1 595 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 TUBA4BQ9H853 241 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 ERRFI1Q9UJM3 462 aaPredicted RBP16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 RBM7Q9Y580 266 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms