RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 LINC00312Q9Y6C7 94 aa8.23□□□□□ -1.09
ATG4A-206ENST00000457035 IGHV3OR16-10A0A075B7F0 116 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 A0A0A6YYD4 124 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 A0A0B4J203 849 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 TRAV40A0A0B4J280 105 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 TMEM272A0A1B0GTI8 110 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 A0A1W2PPH5 198 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 ODAMA1E959 279 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 SMIM30A4D0T7 59 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 FOXI3A8MTJ6 420 aaPredicted RBP8.22□□□□□ -1.09
ATG4A-206ENST00000457035 RNASEK-C17orf49H0YIS7 233 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 HSPB6O14558 160 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 SLC2A2P11168 524 aaPredicted RBP8.22□□□□□ -1.09
ATG4A-206ENST00000457035 EPHA1P21709 976 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 TMEM50BP56557 158 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 BPIFB3P59826 476 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 LSM3P62310 102 aaKnown RBP8.22□□□□□ -1.09
ATG4A-206ENST00000457035 PRB3Q04118 309 aaPredicted RBP8.22□□□□□ -1.09
ATG4A-206ENST00000457035 BLMHQ13867 455 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 GPR157Q5UAW9 335 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 SLC35E4Q6ICL7 350 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 RAB12Q6IQ22 244 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 C9orf139Q6ZV77 190 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 ANKRD13BQ86YJ7 626 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 GAPTQ8N292 157 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 LHX4Q969G2 390 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 ZNF714Q96N38 554 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 NICN1Q9BSH3 213 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 ING3Q9NXR8 418 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 TAS2R3Q9NYW6 316 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 KIF25Q9UIL4 384 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 RAB22AQ9UL26 194 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 UBE2J1Q9Y385 318 aaPredicted RBP8.22□□□□□ -1.09
ATG4A-206ENST00000457035 COL6A5A8TX70 2615 aa8.22□□□□□ -1.09
ATG4A-206ENST00000457035 TRGV10A0A0A0MS01 117 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 IGHV1-69DA0A0B4J2H0 117 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 MCRIP1C9JLW8 97 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 H3BUI4 141 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 SOCS1O15524 211 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 PDCD6O75340 191 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 MMP23AO75900 390 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 IGHV1-69P01742 117 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 RBP4P02753 201 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 MT-ND4P03905 459 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 IGHV1-8P0DP01 117 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 FPR2P25090 351 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 CHATP28329 748 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 RPS19P39019 145 aaKnown RBP8.21□□□□□ -1.1
ATG4A-206ENST00000457035 UBE2E1P51965 193 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 EFNB2P52799 333 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 MXD1Q05195 221 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 RBM39Q14498 530 aaKnown RBP8.21□□□□□ -1.1
ATG4A-206ENST00000457035 C17orf58Q2M2W7 97 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 SFXN4Q6P4A7 337 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 BRD3OSQ6XYD6 125 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 ZNF497Q6ZNH5 498 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 SLC16A12Q6ZSM3 486 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 PDZD9Q8IXQ8 264 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 ZNF565Q8N9K5 539 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 OR13A1Q8NGR1 328 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 C22orf15Q8WYQ4 148 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 TMEM158Q8WZ71 300 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 DYRK2Q92630 601 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 PTX4Q96A99 478 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 URM1Q9BTM9 101 aaKnown RBP8.21□□□□□ -1.1
ATG4A-206ENST00000457035 FAAP24Q9BTP7 215 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 MS4A7Q9GZW8 240 aaPredicted RBP8.21□□□□□ -1.1
ATG4A-206ENST00000457035 NAA50Q9GZZ1 169 aaKnown RBP8.21□□□□□ -1.1
ATG4A-206ENST00000457035 PRDM13Q9H4Q3 707 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 LINC00574Q9H8X3 128 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 LIN7BQ9HAP6 207 aa8.21□□□□□ -1.1
ATG4A-206ENST00000457035 MEIKINA0A087WXM9 373 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 TRAV39A0A0B4J263 110 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 hCG_1809904A0A1W2PP81 198 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 A0A1W2PPE2 198 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 A0A1W2PR64 198 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 A0A1W2PRV1 198 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 UBE2QL1A1L167 161 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 RAB6AP20340 208 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 GZMHP20718 246 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 BLVRBP30043 206 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-206ENST00000457035 RPL5P46777 297 aaKnown RBP8.2□□□□□ -1.1
ATG4A-206ENST00000457035 NCS1P62166 190 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 KLRD1Q13241 179 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 SCGB2A2Q13296 93 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 CTF1Q16619 201 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 RUSC1-AS1Q66K80 236 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 NCR3LG1Q68D85 454 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 C6orf201Q7Z4U5 140 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 AJUBAQ96IF1 538 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 ZNF48Q96MX3 618 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-206ENST00000457035 NEDD4LQ96PU5 975 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 SULT4A1Q9BR01 284 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 HEXA-AS1Q9H8Q6 139 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 ETAA1Q9NY74 926 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 OR6C3Q9NZP0 311 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 DAPK2Q9UIK4 370 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 HSF4Q9ULV5 492 aa8.2□□□□□ -1.1
ATG4A-206ENST00000457035 KBTBD11-OT1A0A1B0GTJ5 212 aa8.19□□□□□ -1.1
ATG4A-206ENST00000457035 TMEM30CPA0ZSE6 113 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms