RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 RNF185Q96GF1 192 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 PPP1R2P1Q96PQ5 205 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 VPS25Q9BRG1 176 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 CCDC32Q9BV29 185 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 OCR1Q9BZK8 76 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 SLC25A31Q9H0C2 315 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF71Q9NQZ8 489 aaPredicted RBP2.87□□□□□ -1.95
SF3B1-205ENST00000424674 HEBP1Q9NRV9 189 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 MED29Q9NX70 200 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 MRPL27Q9P0M9 148 aaKnown RBP2.87□□□□□ -1.95
SF3B1-205ENST00000424674 SS18L2Q9UHA2 77 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 PCYOX1Q9UHG3 505 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 PRNDQ9UKY0 176 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 SIGLEC7Q9Y286 467 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 UGT2A1Q9Y4X1 527 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 SLC25A15Q9Y619 301 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 ADAMTSL3P82987 1691 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 CLUHO75153 1309 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 TAF1LQ8IZX4 1826 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 SETD5Q9C0A6 1442 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 CNTLNQ9NXG0 1405 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 MRC2Q9UBG0 1479 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 GMNCA6NCL1 334 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 PGPA6NDG6 321 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 C5orf58C9J3I9 102 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 K7EQS6 105 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 HMGB3O15347 200 aaKnown RBP2.86□□□□□ -1.95
SF3B1-205ENST00000424674 LYPLA1O75608 230 aaPredicted RBP2.86□□□□□ -1.95
SF3B1-205ENST00000424674 MMP23AO75900 390 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 EPPINO95925 133 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 IGHG2P01859 326 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 ATP5G1P05496 136 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 FBP1P09467 338 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 CECR9P0C854 216 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 SPI1P17947 270 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 PRTN3P24158 256 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 ZBTB25P24278 435 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 PRSS3P35030 304 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 NDUFA8P51970 172 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF133P52736 654 aaPredicted RBP2.86□□□□□ -1.95
SF3B1-205ENST00000424674 SLC25A1P53007 311 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 DSCR9P59020 149 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 TAS2R46P59540 309 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 DNAJB13P59910 316 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 RPS28P62857 69 aaKnown RBP2.86□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF146Q15072 292 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 GSG1Q2KHT4 349 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 PLPPR5Q32ZL2 321 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 FAM201AQ5SY85 155 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 HENMT1Q5T8I9 393 aaKnown RBP2.86□□□□□ -1.95
SF3B1-205ENST00000424674 SPATA31B1PQ5VZV4 182 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 ZFAND6Q6FIF0 208 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 SLC35E4Q6ICL7 350 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 ALKAL1Q6UXT8 129 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 GOLT1AQ6ZVE7 132 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 C11orf72Q8NBR9 251 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 CCL17Q92583 94 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 TCEAL3Q969E4 200 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 EXOSC8Q96B26 276 aaKnown RBP2.86□□□□□ -1.95
SF3B1-205ENST00000424674 ATXN7L3BQ96GX2 97 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 CAPZA3Q96KX2 299 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 FOPNLQ96NB1 174 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF184Q99676 751 aaPredicted RBP2.86□□□□□ -1.95
SF3B1-205ENST00000424674 EFCAB11Q9BUY7 163 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 PBDC1Q9BVG4 233 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 SFXN3Q9BWM7 321 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 GABARAPL3Q9BY60 117 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 TMEM126AQ9H061 195 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 DEFB127Q9H1M4 99 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 PARLQ9H300 379 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 HMG20AQ9NP66 347 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 MMP26Q9NRE1 261 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 TMEM216Q9P0N5 145 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 CLCF1Q9UBD9 225 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 SSR3Q9UNL2 185 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 TONSLQ96HA7 1378 aa2.86□□□□□ -1.95
SF3B1-205ENST00000424674 IGHV4-30-2A0A087WSY4 118 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 A0A087WWV3 80 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 hADV38S2A0JD32 116 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 MYBPHLA2RUH7 354 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 OR5H1A6NKK0 313 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 IFITM10A6NMD0 228 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 H7C1C5 153 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 K7N7A8 449 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 M0QYV0 167 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 AIPO00170 330 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 DEGS1O15121 323 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 CHST10O43529 356 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 TBL1XO60907 577 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 SPAG7O75391 227 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 NDUFC2O95298 119 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 CA2P00918 260 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 C1QBP02746 253 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 CRYBA1P05813 215 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 DBIP07108 87 aaKnown RBP2.85□□□□□ -1.95
SF3B1-205ENST00000424674 OR8U8P0C7N1 319 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 CDK2P24941 298 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 MARK3P27448 753 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 AQP1P29972 269 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 APLNRP35414 380 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms