RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ANOS1P23352 680 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 GLRA1P23415 457 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 OPRM1P35372 400 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 KIR2DL2P43627 348 aaPredicted RBP11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 HERV-K104P61576 105 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 PRDX4Q13162 271 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 GUSBP1Q15486 140 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 LRRC37A5PQ49AS3 106 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 UNQ6126/PRO20091Q6UXV3 157 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 TFAP2EQ6VUC0 442 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 NUFIP2Q7Z417 695 aaKnown RBP11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 ZNF611Q8N823 705 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 STOML3Q8TAV4 291 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 GTF3AQ92664 365 aaKnown RBP11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 TMEM230Q96A57 120 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 MBD6Q96DN6 1003 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 SFXN3Q9BWM7 321 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 FN3KRPQ9HA64 309 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 RASL12Q9NYN1 266 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 MBD2Q9UBB5 411 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 ZNF230Q9UIE0 474 aaPredicted RBP11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 NBEAL1Q6ZS30 2694 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 KIR2DS1A0A191URI9 304 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 MFSD2BA6NFX1 497 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 A6NNC1 897 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 SMAD7O15105 426 aaKnown RBP11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 TNFSF13O75888 250 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 CNOT4O95628 575 aaKnown RBP11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 IL18BPO95998 194 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 IGHV3-9P01782 118 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 SELEP16581 610 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 TUBG1P23258 451 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 S100GP29377 79 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 KIR2DS4P43632 304 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 FGF12P61328 243 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 NKX6-1P78426 367 aaPredicted RBP11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 RBM39Q14498 530 aaKnown RBP11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 KIR2DS1Q14954 304 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 TBC1D28Q2M2D7 210 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 PAN3Q58A45 887 aaKnown RBP11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 SIGIRRQ6IA17 410 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 VWA1Q6PCB0 445 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 SLC25A26Q70HW3 274 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 OR10AD1Q8NGE0 317 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 OR56B2PQ8NGI1 322 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 OR1K1Q8NGR3 316 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 STARD4Q96DR4 205 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 GALNT14Q96FL9 552 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 POM121L2Q96KW2 1035 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 SULT4A1Q9BR01 284 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 C12orf49Q9H741 205 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 TUBG2Q9NRH3 451 aa11.01□□□□□ -0.65
SMARCB1-203ENST00000407082 A0A096LPE4 126 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 A0A1W2PPZ6 126 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 RNF222A6NCQ9 220 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 TEX46H3BTG2 121 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 H7C1Q1 480 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 GEMIN2O14893 280 aaKnown RBP11□□□□□ -0.65
SMARCB1-203ENST00000407082 PLATP00750 562 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 KNG1P01042 644 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 HLA-HP01893 362 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 HOXC12P31275 282 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 GNG3P63215 75 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 SUPT4H1P63272 117 aaKnown RBP11□□□□□ -0.65
SMARCB1-203ENST00000407082 IL13RA2Q14627 380 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 UQCC3Q6UW78 93 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 Q8IYB0 196 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 LGI3Q8N145 548 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 LRTM2Q8N967 370 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 SUN5Q8TC36 379 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 BCL2L2Q92843 193 aaPredicted RBP11□□□□□ -0.65
SMARCB1-203ENST00000407082 AQP10Q96PS8 301 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 PKIBQ9C010 78 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 SHARPINQ9H0F6 387 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 PLEKHA2Q9HB19 425 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 STARD10Q9Y365 291 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 ATRQ13535 2644 aa11□□□□□ -0.65
SMARCB1-203ENST00000407082 IGKV1-12A0A0C4DH73 117 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 CD300LBA8K4G0 201 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 F8VVB4 439 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 F8VWA3 439 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 OR7C1O76099 320 aaPredicted RBP10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 CGAP01215 116 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 IGKV1D-12P01611 117 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 LUMP51884 338 aaPredicted RBP10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 UBE2NP61088 152 aaKnown RBP10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 SLC22A25Q6T423 547 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 C1orf174Q8IYL3 243 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 STPG2Q8N412 459 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 POC1AQ8NBT0 407 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 MAFIPQ8WZ33 124 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 MOB3AQ96BX8 217 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 MICU1Q9BPX6 476 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 PIGMQ9H3S5 423 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 NAA60Q9H7X0 242 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 ZC4H2Q9NQZ6 224 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 PLSCR4Q9NRQ2 329 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 PROCRQ9UNN8 238 aa10.99□□□□□ -0.65
SMARCB1-203ENST00000407082 DUXBA0A1W2PPF3 345 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 RAB19A4D1S5 217 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms