RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 FAM216AQ8WUB2 273 aa8.7□□□□□ -1.02
RPAIN-204ENST00000405578 ISOC1Q96CN7 298 aa8.7□□□□□ -1.02
RPAIN-204ENST00000405578 LPAR5Q9H1C0 372 aa8.7□□□□□ -1.02
RPAIN-204ENST00000405578 ATG5Q9H1Y0 275 aa8.7□□□□□ -1.02
RPAIN-204ENST00000405578 C7orf69Q9H7B7 122 aa8.7□□□□□ -1.02
RPAIN-204ENST00000405578 MMP26Q9NRE1 261 aa8.7□□□□□ -1.02
RPAIN-204ENST00000405578 ETAA1Q9NY74 926 aa8.7□□□□□ -1.02
RPAIN-204ENST00000405578 OR6C3Q9NZP0 311 aa8.7□□□□□ -1.02
RPAIN-204ENST00000405578 RCC2Q9P258 522 aaKnown RBP8.7□□□□□ -1.02
RPAIN-204ENST00000405578 ONECUT1Q9UBC0 465 aa8.7□□□□□ -1.02
RPAIN-204ENST00000405578 KPTNQ9Y664 436 aa8.7□□□□□ -1.02
RPAIN-204ENST00000405578 AUP1Q9Y679 476 aa8.7□□□□□ -1.02
RPAIN-204ENST00000405578 MEIKINA0A087WXM9 373 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 A0A0B4J203 849 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 ODAMA1E959 279 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 ZNF701M0R085 212 aaPredicted RBP8.69□□□□□ -1.02
RPAIN-204ENST00000405578 M0R1W7 72 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 SNRPBP14678 240 aaKnown RBP8.69□□□□□ -1.02
RPAIN-204ENST00000405578 ZNF182P17025 639 aaPredicted RBP8.69□□□□□ -1.02
RPAIN-204ENST00000405578 VEGFCP49767 419 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 PAX5Q02548 391 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 AESQ08117 197 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 SCGB2A2Q13296 93 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 TMEM200BQ69YZ2 307 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 C1orf122Q6ZSJ8 110 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 Q6ZTK2 550 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 FAM89BQ8N5H3 189 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 KIR3DL3Q8N743 410 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 LY6G5BQ8NDX9 201 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 NDNFQ8TB73 568 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 ZNF418Q8TF45 676 aaPredicted RBP8.69□□□□□ -1.02
RPAIN-204ENST00000405578 RAB3CQ96E17 227 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 GAL3ST2Q9H3Q3 398 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 RIMS4Q9H426 269 aaPredicted RBP8.69□□□□□ -1.02
RPAIN-204ENST00000405578 KCNK15Q9H427 330 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 NCOR1P1Q9H4R4 102 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 RAB9BQ9NP90 201 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 C19orf12Q9NSK7 152 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 RHBDL2Q9NX52 303 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 ING3Q9NXR8 418 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 RSL24D1Q9UHA3 163 aaKnown RBP8.69□□□□□ -1.02
RPAIN-204ENST00000405578 SPATA2Q9UM82 520 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 LINC00312Q9Y6C7 94 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 CEPT1Q9Y6K0 416 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 TANC2Q9HCD6 1990 aa8.69□□□□□ -1.02
RPAIN-204ENST00000405578 A0A0A6YYH2 397 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 A6NJ64 397 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 H3BMQ9 156 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 TRIM77I1YAP6 450 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 TOX4O94842 621 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 PAHP00439 452 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 ZNF728P0DKX0 622 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 CHATP28329 748 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 ARF6P62330 175 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 PAX2Q02962 417 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 PAX8Q06710 450 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 SLC35E4Q6ICL7 350 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 TREML4Q6UXN2 200 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 FGFRL1Q8N441 504 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 OR10R2Q8NGX6 335 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 S100A16Q96FQ6 103 aaKnown RBP8.68□□□□□ -1.02
RPAIN-204ENST00000405578 ZNF714Q96N38 554 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 WDFY2Q96P53 400 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 NICN1Q9BSH3 213 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 METTL8Q9H825 291 aaKnown RBP8.68□□□□□ -1.02
RPAIN-204ENST00000405578 CHMP1AQ9HD42 196 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-204ENST00000405578 DIABLOQ9NR28 239 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 HSF4Q9ULV5 492 aa8.68□□□□□ -1.02
RPAIN-204ENST00000405578 UBE2J1Q9Y385 318 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-204ENST00000405578 NBEAL2Q6ZNJ1 2754 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 UBE2QL1A1L167 161 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 SOCS1O15524 211 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 FCN3O75636 299 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 RBP4P02753 201 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 GZMHP20718 246 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 GLIPR1P48060 266 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 EFNB2P52799 333 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 SPCS2Q15005 226 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 UBE2NLQ5JXB2 153 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 C6orf183Q5T699 404 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 NCR3LG1Q68D85 454 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 TRAT1Q6PIZ9 186 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 BRICD5Q6PL45 260 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 ZNF497Q6ZNH5 498 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 C6orf201Q7Z4U5 140 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 TPRX1Q8N7U7 411 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 SAMD12Q8N8I0 201 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 NANPQ8TBE9 248 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 DACT3Q96B18 629 aaPredicted RBP8.67□□□□□ -1.02
RPAIN-204ENST00000405578 DGCR14Q96DF8 476 aaKnown RBP8.67□□□□□ -1.02
RPAIN-204ENST00000405578 ARHGAP5-AS1Q96IT6 56 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 CMTM3Q96MX0 182 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 PCGF1Q9BSM1 259 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 FAAP24Q9BTP7 215 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 TMPRSS13Q9BYE2 586 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 TAS2R3Q9NYW6 316 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 KCNIP1Q9NZI2 227 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 CCDC59Q9P031 241 aaKnown RBP8.67□□□□□ -1.02
RPAIN-204ENST00000405578 COMMD3Q9UBI1 195 aa8.67□□□□□ -1.02
RPAIN-204ENST00000405578 KIF25Q9UIL4 384 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms