RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 SFXN4Q6P4A7 337 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 C9orf139Q6ZV77 190 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 TCF23Q7RTU1 214 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 ANKRD13BQ86YJ7 626 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 PDZD9Q8IXQ8 264 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 FAM89BQ8N5H3 189 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 OR13D1Q8NGV5 346 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 ZNF418Q8TF45 676 aaPredicted RBP11.22□□□□□ -0.61
VPREB1-202ENST00000403807 C22orf15Q8WYQ4 148 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 PTX4Q96A99 478 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 NICN1Q9BSH3 213 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 SUCNR1Q9BXA5 334 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 UBE2QL1A1L167 161 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 METTL21EPA6NDL7 271 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 RNASEK-C17orf49H0YIS7 233 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 MT-ND4P03905 459 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 IGHV1-8P0DP01 117 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 RAB6AP20340 208 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 CHATP28329 748 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 TGFBR1P36897 503 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 GLP1RP43220 463 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 RPL5P46777 297 aaKnown RBP11.21□□□□□ -0.61
VPREB1-202ENST00000403807 VEGFCP49767 419 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 DLX1P56177 255 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 IDNKQ5T6J7 187 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 OR52W1Q6IF63 320 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 RBMS3Q6XE24 437 aaKnown RBP11.21□□□□□ -0.61
VPREB1-202ENST00000403807 BRD3OSQ6XYD6 125 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 ZNF497Q6ZNH5 498 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 Q6ZTK2 550 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 OR56B1Q8NGI3 324 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 SCOCQ9UIL1 159 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 SESN1Q9Y6P5 492 aa11.21□□□□□ -0.61
VPREB1-202ENST00000403807 A0A0A6YYD4 124 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 A0A0B4J203 849 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 KBTBD11-OT1A0A1B0GTJ5 212 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 SOCS1O15524 211 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 TCF21O43680 179 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 CLPXO76031 633 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 IL1AP01583 271 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 CGB3P0DN86 165 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 CGB7P0DN87 165 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 RPS19P39019 145 aaKnown RBP11.2□□□□□ -0.62
VPREB1-202ENST00000403807 SERPINB10P48595 397 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 VBP1P61758 197 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 PRB3Q04118 309 aaPredicted RBP11.2□□□□□ -0.62
VPREB1-202ENST00000403807 KLRD1Q13241 179 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 C17orf58Q2M2W7 97 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 GPR107Q5VW38 600 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 RUSC1-AS1Q66K80 236 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 HEPN1Q6WQI6 88 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 ZNF782Q6ZMW2 699 aaPredicted RBP11.2□□□□□ -0.62
VPREB1-202ENST00000403807 USP43Q70EL4 1123 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 C6orf201Q7Z4U5 140 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 BCL6BQ8N143 479 aaPredicted RBP11.2□□□□□ -0.62
VPREB1-202ENST00000403807 PNKDQ8N490 385 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 OR13A1Q8NGR1 328 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 MRGPRDQ8TDS7 321 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 CCDC107Q8WV48 283 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 SLC6A7Q99884 636 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 SULT4A1Q9BR01 284 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 FAAP24Q9BTP7 215 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 TRAPPC2LQ9UL33 140 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 HSF4Q9ULV5 492 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 NAV3Q8IVL0 2385 aa11.2□□□□□ -0.62
VPREB1-202ENST00000403807 A0A0A6YYJ9 748 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 A0A1W2PRD5 423 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 A0A1W2PRF3 423 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 A0A1W2PRM7 423 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 NPFFO15130 113 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 CDK2P24941 298 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 EFNB2P52799 333 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 LGALS4P56470 323 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 TMEM50BP56557 158 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 SCAND1P57086 179 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 NCS1P62166 190 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 PLA2G7Q13093 441 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 HCP5Q6MZN7 132 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 PRIMA1Q86XR5 153 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 GAPTQ8N292 157 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 JMJD8Q96S16 334 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 ATG5Q9H1Y0 275 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 RAB9BQ9NP90 201 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 CALYQ9NYX4 217 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 FAM96BQ9Y3D0 163 aa11.19□□□□□ -0.62
VPREB1-202ENST00000403807 TRAV39A0A0B4J263 110 aa11.18□□□□□ -0.62
VPREB1-202ENST00000403807 MEIOCA2RUB1 952 aa11.18□□□□□ -0.62
VPREB1-202ENST00000403807 ORC5O43913 435 aa11.18□□□□□ -0.62
VPREB1-202ENST00000403807 MMP23AO75900 390 aa11.18□□□□□ -0.62
VPREB1-202ENST00000403807 GABARAPO95166 117 aa11.18□□□□□ -0.62
VPREB1-202ENST00000403807 SNRPBP14678 240 aaKnown RBP11.18□□□□□ -0.62
VPREB1-202ENST00000403807 OMGP23515 440 aa11.18□□□□□ -0.62
VPREB1-202ENST00000403807 COX7A1P24310 79 aa11.18□□□□□ -0.62
VPREB1-202ENST00000403807 MIDNQ504T8 468 aa11.18□□□□□ -0.62
VPREB1-202ENST00000403807 C6orf183Q5T699 404 aa11.18□□□□□ -0.62
VPREB1-202ENST00000403807 PRAMEF5Q5TYX0 476 aa11.18□□□□□ -0.62
VPREB1-202ENST00000403807 TRAT1Q6PIZ9 186 aa11.18□□□□□ -0.62
VPREB1-202ENST00000403807 SLC16A12Q6ZSM3 486 aa11.18□□□□□ -0.62
VPREB1-202ENST00000403807 RTN4RL2Q86UN3 420 aa11.18□□□□□ -0.62
VPREB1-202ENST00000403807 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms