RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 GVQW1Q8N7I0 195 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 NEURL2Q9BR09 285 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 SLC25A22Q9H936 323 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 SLC2A9Q9NRM0 540 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 A0A1W2PPV9 198 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 RAB29O14966 203 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 DEDDO75618 318 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 SPNP16150 400 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 R4GN57 208 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 A0A1W2PR80 420 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 OR5AL1P0C617 328 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 SELENOPP49908 381 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 PDCD1Q15116 288 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 TNXAQ16473 311 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 RNF151Q2KHN1 245 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 SPNS3Q6ZMD2 512 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 ZNF71Q9NQZ8 489 aaPredicted RBP4.8□□□□□ -1.64
VPS13C-204ENST00000395898 RNF7Q9UBF6 113 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 DOCK7Q96N67 2140 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 CDS2O95674 445 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 CXorf1O96002 111 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 PMCHP20382 165 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 MRPS11P82912 194 aaKnown RBP4.8□□□□□ -1.64
VPS13C-204ENST00000395898 CD226Q15762 336 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 DGAT2L7PQ6IED9 249 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 CDIPTO14735 213 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 GATCO43716 136 aaKnown RBP4.8□□□□□ -1.64
VPS13C-204ENST00000395898 NEURL1O76050 574 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 TEX29Q8N6K0 151 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 PRR7Q8TB68 274 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 ABHD3Q8WU67 409 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 TMEM38BQ9NVV0 291 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 FBXL17Q9UF56 701 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 GREB1LQ9C091 1923 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 IGSF23A1L1A6 192 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 F5H697 171 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 H3BMH7 237 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 MNX1P50219 401 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 SMAGPQ0VAQ4 97 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 ZNF596Q8TC21 504 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 PTPMT1Q8WUK0 201 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 GSX1Q9H4S2 264 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 PLSCR3Q9NRY6 295 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 NAGKQ9UJ70 344 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 F2RL2O00254 374 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 SYNGR1O43759 233 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 HIST1H1EP10412 219 aaKnown RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 ZP4Q12836 540 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 C16orf47Q6ZP98 133 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 TGIF2LXQ8IUE1 241 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 C5orf17Q8NAS9 161 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 CFHR5Q9BXR6 569 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 RAB33BQ9H082 229 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 SLC52A3Q9NQ40 469 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 HSPB8Q9UJY1 196 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 GBF1Q92538 1859 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 NYNRINQ9P2P1 1898 aaKnown RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 HPXP02790 462 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 RPL7P18124 248 aaKnown RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 POLR2GP62487 172 aaKnown RBP eCLIP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 UBE2L3P68036 154 aaKnown RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 RNF133Q8WVZ7 376 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 TMEM37Q8WXS4 190 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 FAM210BQ96KR6 192 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 HARBI1Q96MB7 349 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 MPDZO75970 2070 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 FFAR1O14842 300 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 CHST1O43916 411 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 GCSHP23434 173 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 COX7A1P24310 79 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 IZUMO4Q1ZYL8 232 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 TUSC1Q2TAM9 212 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 KRTCAP3Q53RY4 240 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 MFSD2BA6NFX1 497 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 C16orf97H3BN30 126 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 LYZP61626 148 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 HLA-DRB3P79483 266 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 RIGQ13278 110 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 GAB4Q2WGN9 574 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 ZNF788Q6ZQV5 615 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 CLN8Q9UBY8 286 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 C11orf94C9JXX5 98 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 CORTO00230 105 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 BMPR1BO00238 502 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 GGTLC2Q14390 218 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 ELOBQ15370 118 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 CLEC9AQ6UXN8 241 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 ZMIZ1Q9ULJ6 1067 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 NEU3Q9UQ49 428 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 PTPRDP23468 1912 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 B4E171 279 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 PHOX2AO14813 284 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 P01737 135 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 FAM87AP0C7U9 286 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 COL8A1P27658 744 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 C8orf82Q6P1X6 216 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 FAM24BQ8N5W8 94 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 TMUB1Q9BVT8 246 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 Q9N2K0 584 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms