RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 ZNF729A6NN14 1252 aaPredicted RBP7.99□□□□□ -1.13
CD48-202ENST00000368046 ODF3BA8MYP8 253 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 H3BUI4 141 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 GPR137BO60478 399 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 MMP23AO75900 390 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 ARG1P05089 322 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 UCHL1P09936 223 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 CPEP16870 476 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 GZMHP20718 246 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 CDK2P24941 298 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 MAP2K4P45985 399 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 EMX1Q04741 257 aaPredicted RBP7.99□□□□□ -1.13
CD48-202ENST00000368046 ATXN7L3Q14CW9 347 aaPredicted RBP7.99□□□□□ -1.13
CD48-202ENST00000368046 C17orf58Q2M2W7 97 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 C1orf100Q5SVJ3 147 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 ATAD3CQ5T2N8 411 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 FAM27D1Q5T7N8 215 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 AWAT2Q6E213 333 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 SLC35E4Q6ICL7 350 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 TMEM91Q6ZNR0 172 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 LHFPL4Q7Z7J7 247 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 LRRTM1Q86UE6 522 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 RTN4RL2Q86UN3 420 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 OR4F5Q8NH21 305 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 TAF15Q92804 592 aaKnown RBP eCLIP7.99□□□□□ -1.13
CD48-202ENST00000368046 DPCDQ9BVM2 203 aaPredicted RBP7.99□□□□□ -1.13
CD48-202ENST00000368046 CLEC7AQ9BXN2 247 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 SLITRK2Q9H156 845 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 PPIL3Q9H2H8 161 aaKnown RBP7.99□□□□□ -1.13
CD48-202ENST00000368046 SPACA1Q9HBV2 294 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 KIF25Q9UIL4 384 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 VPREB3Q9UKI3 123 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 RRP15Q9Y3B9 282 aaKnown RBP7.99□□□□□ -1.13
CD48-202ENST00000368046 LRRC42Q9Y546 428 aa7.99□□□□□ -1.13
CD48-202ENST00000368046 TENM1Q9UKZ4 2725 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 FAM90A10PA6NDY2 464 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 FAM90A18PA6NE21 464 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 FAM90A16PA6NEW6 464 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 FAM90A20PA6NIJ5 464 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 FAM90A7PA6NKC0 464 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 FAM90A22PA8MWA6 464 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 FAM90A12PA8MX19 464 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 FAM90A5PA8MXJ8 464 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 FAM90A23PA8MXZ1 464 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 H3BUX3 64 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 HSPB6O14558 160 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 ARL6IP5O75915 188 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 CLPXO76031 633 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 NDUFA7O95182 113 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 GLAP06280 429 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 FAM90A15PP0C7V4 464 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 FAM90A13PP0C7W8 464 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 FAM90A14PP0C7W9 464 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 FAM90A24PP0C7X0 464 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 UBBP0CG47 229 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 OMGP23515 440 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 PRRX1P54821 245 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 RBM39Q14498 530 aaKnown RBP7.98□□□□□ -1.13
CD48-202ENST00000368046 TBCEQ15813 527 aaPredicted RBP7.98□□□□□ -1.13
CD48-202ENST00000368046 SSX2Q16385 188 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 LRRC75BQ2VPJ9 315 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 MINOS1Q5TGZ0 78 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 RSBN1Q5VWQ0 802 aaPredicted RBP7.98□□□□□ -1.13
CD48-202ENST00000368046 OR13A1Q8NGR1 328 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 PLPPR1Q8TBJ4 325 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 PIFOQ8TCI5 191 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 LINC00574Q9H8X3 128 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 ACOT13Q9NPJ3 140 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 ZNF581Q9P0T4 197 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 MINOS1-NBL1R4GNA1 71 aa7.98□□□□□ -1.13
CD48-202ENST00000368046 A0A087X0M5 115 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 A0A1B0GX30 115 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 CLPSL1A2RUU4 121 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 VGLL3A8MV65 326 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 MCRIP1C9JLW8 97 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 NPIPB11E5RHQ5 1161 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 TOR1AO14656 332 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 CRTAPO75718 401 aaPredicted RBP7.97□□□□□ -1.13
CD48-202ENST00000368046 TSPAN9O75954 239 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 IGLV1-47P01700 117 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 MT-ND4P03905 459 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 MGMTP16455 207 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 FUT3P21217 361 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 MDKP21741 143 aaPredicted RBP7.97□□□□□ -1.13
CD48-202ENST00000368046 PAX6P26367 422 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 HTR1DP28221 377 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 CD34P28906 385 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 GABRA5P31644 462 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 GDNFP39905 211 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 RAB13P51153 203 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 PSMD7P51665 324 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 RAG2P55895 527 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 GABARAPL2P60520 117 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 RPS25P62851 125 aaKnown RBP7.97□□□□□ -1.13
CD48-202ENST00000368046 LDLRAD2Q5SZI1 272 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 PRAMEF5Q5TYX0 476 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 SHISA2Q6UWI4 295 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 SLC16A12Q6ZSM3 486 aa7.97□□□□□ -1.13
CD48-202ENST00000368046 ZNF367Q7RTV3 350 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms