RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 NEIL1Q96FI4 390 aaPredicted RBP15.07■□□□□ 0
HMGA1-201ENST00000311487 SDSLQ96GA7 329 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 ARHGAP5-AS1Q96IT6 56 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 ST6GAL2Q96JF0 529 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 DPCDQ9BVM2 203 aaPredicted RBP15.07■□□□□ 0
HMGA1-201ENST00000311487 DPAGT1Q9H3H5 408 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 CLN8Q9UBY8 286 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 NDUFB3O43676 98 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 TK1P04183 234 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 GNB3P16520 340 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 OR3A1P47881 315 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 TMEM50BP56557 158 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 GNB2P62879 340 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 PLAC9Q5JTB6 97 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 NLRC3Q7RTR2 1065 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 ZNF561Q8N587 486 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 C15orf40Q8WUR7 153 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 FCAMRQ8WWV6 532 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 MRPS24Q96EL2 167 aaKnown RBP15.07■□□□□ 0
HMGA1-201ENST00000311487 ARPC5LQ9BPX5 153 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 DCTN5Q9BTE1 182 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 URM1Q9BTM9 101 aaKnown RBP15.07■□□□□ 0
HMGA1-201ENST00000311487 RHOFQ9HBH0 211 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 MAST4O15021 2626 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 KIAA2026Q5HYC2 2103 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 TLN2Q9Y4G6 2542 aa15.06■□□□□ 0
HMGA1-201ENST00000311487 WNK2Q9Y3S1 2297 aa15.06■□□□□ 0
HMGA1-201ENST00000311487 MT-ND4P03905 459 aa15.06■□□□□ 0
HMGA1-201ENST00000311487 CPT2P23786 658 aa15.06■□□□□ 0
HMGA1-201ENST00000311487 SULT4A1Q9BR01 284 aa15.06■□□□□ 0
HMGA1-201ENST00000311487 SSBP3Q9BWW4 388 aaPredicted RBP15.06■□□□□ 0
HMGA1-201ENST00000311487 TM2D1Q9BX74 207 aa15.06■□□□□ 0
HMGA1-201ENST00000311487 PLEKHJ1Q9NW61 149 aa15.06■□□□□ 0
HMGA1-201ENST00000311487 KLK11Q9UBX7 282 aa15.06■□□□□ 0
HMGA1-201ENST00000311487 ZNF221Q9UK13 617 aa15.06■□□□□ 0
HMGA1-201ENST00000311487 A8MV72 311 aaPredicted RBP15.05■□□□□ 0
HMGA1-201ENST00000311487 K7N7A8 449 aa15.05■□□□□ 0
HMGA1-201ENST00000311487 NDUFA2O43678 99 aa15.05■□□□□ 0
HMGA1-201ENST00000311487 IL13RA2Q14627 380 aa15.05■□□□□ 0
HMGA1-201ENST00000311487 ESCO2Q56NI9 601 aa15.05■□□□□ 0
HMGA1-201ENST00000311487 LRRC10Q5BKY1 277 aa15.05■□□□□ 0
HMGA1-201ENST00000311487 NHLRC3Q5JS37 347 aa15.05■□□□□ 0
HMGA1-201ENST00000311487 WDR25Q64LD2 544 aaPredicted RBP15.05■□□□□ 0
HMGA1-201ENST00000311487 BTN2A1Q7KYR7 527 aa15.05■□□□□ 0
HMGA1-201ENST00000311487 PLPPR1Q8TBJ4 325 aa15.05■□□□□ 0
HMGA1-201ENST00000311487 MED30Q96HR3 178 aa15.05■□□□□ 0
HMGA1-201ENST00000311487 SMR3AQ99954 134 aa15.05■□□□□ 0
HMGA1-201ENST00000311487 HDHD3Q9BSH5 251 aaPredicted RBP15.05■□□□□ 0
HMGA1-201ENST00000311487 MMP26Q9NRE1 261 aa15.05■□□□□ 0
HMGA1-201ENST00000311487 RAB27BO00194 218 aa15.05■□□□□ -0
HMGA1-201ENST00000311487 ECDO95905 644 aaPredicted RBP15.05■□□□□ -0
HMGA1-201ENST00000311487 TCRBP04435 133 aa15.05■□□□□ -0
HMGA1-201ENST00000311487 GLIPR1P48060 266 aa15.05■□□□□ -0
HMGA1-201ENST00000311487 RAB25P57735 213 aa15.05■□□□□ -0
HMGA1-201ENST00000311487 ERVFRD-1P60508 538 aa15.05■□□□□ -0
HMGA1-201ENST00000311487 PRB3Q04118 309 aaPredicted RBP15.05■□□□□ -0
HMGA1-201ENST00000311487 C5orf24Q7Z6I8 188 aa15.05■□□□□ -0
HMGA1-201ENST00000311487 CCDC107Q8WV48 283 aa15.05■□□□□ -0
HMGA1-201ENST00000311487 DIABLOQ9NR28 239 aa15.05■□□□□ -0
HMGA1-201ENST00000311487 KAAG1Q9UBP8 84 aa15.05■□□□□ -0
HMGA1-201ENST00000311487 FBLN5Q9UBX5 448 aa15.05■□□□□ -0
HMGA1-201ENST00000311487 NUBP2Q9Y5Y2 271 aa15.05■□□□□ -0
HMGA1-201ENST00000311487 ANKRD20A5PA0PJZ0 165 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 METTL21EPA6NDL7 271 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 F5H0A9 414 aaPredicted RBP15.04■□□□□ -0
HMGA1-201ENST00000311487 FSTL3O95633 263 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 FCER2P06734 321 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 RAB6AP20340 208 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 FUT3P21217 361 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 LMO1P25800 156 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 CCR6P51684 374 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 Q6ZTK2 550 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 FAM89BQ8N5H3 189 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 OR10R2Q8NGX6 335 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 HRASLSQ9HDD0 168 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 C19orf12Q9NSK7 152 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 NUDT15Q9NV35 164 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 KCNK7Q9Y2U2 307 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 ABCA1O95477 2261 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 C22orf46C9J442 243 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 PDCD6O75340 191 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 CHATP28329 748 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 DLX1P56177 255 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 AP3S2P59780 193 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 LOXL1Q08397 574 aaPredicted RBP15.04■□□□□ -0
HMGA1-201ENST00000311487 MPV17LQ2QL34 196 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 TMEM249Q2WGJ8 235 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 THOC7Q6I9Y2 204 aaKnown RBP15.04■□□□□ -0
HMGA1-201ENST00000311487 OR56B1Q8NGI3 324 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 RAB39BQ96DA2 213 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 RAB3CQ96E17 227 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 COQ2Q96H96 371 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 SNX22Q96L94 193 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 PECRQ9BY49 303 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 COPZ2Q9P299 210 aa15.04■□□□□ -0
HMGA1-201ENST00000311487 YLPM1P49750 1951 aaKnown RBP15.03■□□□□ -0
HMGA1-201ENST00000311487 HIVEP1P15822 2718 aa15.03■□□□□ -0
HMGA1-201ENST00000311487 TRAV6A0A075B6T7 132 aa15.03■□□□□ -0
HMGA1-201ENST00000311487 TRAV18A0A075B6X5 111 aa15.03■□□□□ -0
HMGA1-201ENST00000311487 FOXI3A8MTJ6 420 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms