RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 CORO2AQ92828 525 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TNFRSF14Q92956 283 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 YIPF6Q96EC8 236 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 NICN1Q9BSH3 213 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 CENPOQ9BU64 300 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 LIN7BQ9HAP6 207 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 RAB9BQ9NP90 201 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TRAPPC2LQ9UL33 140 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TMEM272A0A1B0GTI8 110 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 UBE2QL1A1L167 161 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 MEIOCA2RUB1 952 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TRIM77I1YAP6 450 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 CA11O75493 328 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ARG1P05089 322 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 FBP1P09467 338 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 CFPP27918 469 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 BLVRBP30043 206 aaPredicted RBP8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SAA4P35542 130 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 DLX6P56179 175 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 HILS1P60008 231 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 LSM3P62310 102 aaKnown RBP8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 QRFPP83859 136 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 BAMBIQ13145 260 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 DYNC1I2Q13409 638 aaKnown RBP8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 DEFB112Q30KQ8 113 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 C2orf76Q3KRA6 126 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 MIDNQ504T8 468 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 C6orf183Q5T699 404 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 PRAMEF5Q5TYX0 476 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SFXN4Q6P4A7 337 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TRAT1Q6PIZ9 186 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 BRICD5Q6PL45 260 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 HEPN1Q6WQI6 88 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 PNKDQ8N490 385 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 OR56B1Q8NGI3 324 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 OR13A1Q8NGR1 328 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 LPAR5Q9H1C0 372 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TMEM133Q9H2Q1 129 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 RNF167Q9H6Y7 350 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ZMAT3Q9HA38 289 aaKnown RBP8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 PLEKHJ1Q9NW61 149 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 CALYQ9NYX4 217 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 DAPK2Q9UIK4 370 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 RAB22AQ9UL26 194 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SVEP1Q4LDE5 3571 aa8.99□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ZFHX3Q15911 3703 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 A0A0U1RQK1 487 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 KBTBD11-OT1A0A1B0GTJ5 212 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 MDFIC2A0A1B0GVS7 189 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 METTL21EPA6NDL7 271 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 BTBD17A6NE02 478 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 IL1AP01583 271 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 RAB6AP20340 208 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 OMGP23515 440 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 CDK2P24941 298 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 CHATP28329 748 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 VEGFCP49767 419 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 MRPS15P82914 257 aaKnown RBP8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 KRTAP21-3Q3LHN1 58 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ZNF497Q6ZNH5 498 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 C6orf201Q7Z4U5 140 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 GPR141Q7Z602 305 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 C11orf42Q8N5U0 333 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 OR13F1Q8NGS4 319 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 OR4K15Q8NH41 348 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 CCDC107Q8WV48 283 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ZNF48Q96MX3 618 aaPredicted RBP8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 FUNDC2Q9BWH2 189 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 CLEC7AQ9BXN2 247 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 CHMP1AQ9HD42 196 aaPredicted RBP8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 IDI2-AS1Q9NZ38 188 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 FBLN5Q9UBX5 448 aa8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TBL2Q9Y4P3 447 aaKnown RBP8.98□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ANK3Q12955 4377 aaKnown RBP8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 IGHV2-26A0A0B4J1V2 119 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 DNAJC9-AS1A6NH13 148 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TOR1AO14656 332 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 VENTXO95231 258 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SLC2A2P11168 524 aaPredicted RBP8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 GZMHP20718 246 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 NFYBP25208 207 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SSTR5P35346 364 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 LTC4SQ16873 150 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 IDNKQ5T6J7 187 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SIGIRRQ6IA17 410 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 HCP5Q6MZN7 132 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 RTN4RL2Q86UN3 420 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 NR2C2APQ86WQ0 139 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 CROCCP3Q8IVE0 287 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 PIP4P2Q8N4L2 257 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 OR10A7Q8NGE5 316 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 NDNFQ8TB73 568 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ZNF596Q8TC21 504 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TMEM158Q8WZ71 300 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 DYRK2Q92630 601 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ARL11Q969Q4 196 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 KCNIP1Q9NZI2 227 aa8.97□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 A0A0A6YYD4 124 aa8.96□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 A0A0B4J203 849 aa8.96□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 TRAV39A0A0B4J263 110 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms