RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 ZNF846Q147U1 533 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 ARSJQ5FYB0 599 aaPredicted RBP12.06□□□□□ -0.48
UPK3A-201ENST00000216211 TMEM244Q5VVB8 128 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 FDX2Q6P4F2 183 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 TRAPPC6BQ86SZ2 158 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 DNAAF1Q8NEP3 725 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 OR2G2Q8NGZ5 317 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 SLC25A46Q96AG3 418 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 FGGYQ96C11 551 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 MMP28Q9H239 520 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 TMEM133Q9H2Q1 129 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 SEBOXQ9HB31 216 aaPredicted RBP12.06□□□□□ -0.48
UPK3A-201ENST00000216211 AKIP1Q9NQ31 210 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 SIRPB1O00241 398 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 MGST3O14880 152 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 PEX14O75381 377 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 ZNF20P17024 532 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 SDC2P34741 201 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 OR3A1P47881 315 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 MTNR1BP49286 362 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 DYNLT3P51808 116 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 MTCP1P56278 107 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 NANOS3P60323 173 aaKnown RBP12.05□□□□□ -0.48
UPK3A-201ENST00000216211 BLCAPP62952 87 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 ALKBH1Q13686 389 aaKnown RBP12.05□□□□□ -0.48
UPK3A-201ENST00000216211 ZNF146Q15072 292 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 TMEM95Q3KNT9 176 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 KPRPQ5T749 579 aaPredicted RBP12.05□□□□□ -0.48
UPK3A-201ENST00000216211 MINOS1Q5TGZ0 78 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 UNQ9370/PRO34162Q6UXP9 181 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 BAIAP2L2Q6UXY1 529 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 LHFPL2Q6ZUX7 228 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 RNF144BQ7Z419 303 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 WIPF2Q8TF74 440 aaPredicted RBP12.05□□□□□ -0.48
UPK3A-201ENST00000216211 PHYHIPQ92561 330 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 BORCS5Q969J3 196 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 RFT1Q96AA3 541 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 CITED2Q99967 270 aaPredicted RBP12.05□□□□□ -0.48
UPK3A-201ENST00000216211 CLEC7AQ9BXN2 247 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 BARHL1Q9BZE3 327 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 FRRS1LQ9P0K9 344 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 PEX16Q9Y5Y5 336 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 MINOS1-NBL1R4GNA1 71 aa12.05□□□□□ -0.48
UPK3A-201ENST00000216211 PRKACBP22694 351 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 VDAC2P45880 294 aaPredicted RBP12.04□□□□□ -0.48
UPK3A-201ENST00000216211 RPS11P62280 158 aaKnown RBP eCLIP12.04□□□□□ -0.48
UPK3A-201ENST00000216211 PDZK1IP1Q13113 114 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 ACSM3Q53FZ2 586 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 SPIN3Q5JUX0 258 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 UTS2BQ765I0 119 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 CEACAM19Q7Z692 300 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 NDUFA11Q86Y39 141 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 CROCCP3Q8IVE0 287 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 OR10AC1Q8NH08 325 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 R3HDM4Q96D70 268 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 SPACA5Q96QH8 159 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 WDR12Q9GZL7 423 aaKnown RBP12.04□□□□□ -0.48
UPK3A-201ENST00000216211 WNT10AQ9GZT5 417 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 HMG20AQ9NP66 347 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 GLS2Q9UI32 602 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 ZNF281Q9Y2X9 895 aa12.04□□□□□ -0.48
UPK3A-201ENST00000216211 UBE2J1Q9Y385 318 aaPredicted RBP12.04□□□□□ -0.48
UPK3A-201ENST00000216211 IGKV1-12A0A0C4DH73 117 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 FAM172BPA6NC97 362 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 ADARB2-AS1A8MUL3 147 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 OR2H2O95918 312 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 IGKV1D-12P01611 117 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 ISG15P05161 165 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 CLEC2LP0C7M8 214 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 HTR1DP28221 377 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 ERP29P30040 261 aaKnown RBP12.03□□□□□ -0.48
UPK3A-201ENST00000216211 CCR9P51686 369 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 P2RX3P56373 397 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 INSL4Q14641 139 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 YIF1BQ5BJH7 314 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 OXLD1Q5BKU9 147 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 PRAMEF5Q5TYX0 476 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 TPRA1Q86W33 373 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 MFSD4AQ8N468 514 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 OR51A4Q8NGJ6 313 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 OR4P4Q8NGL7 312 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 PALMDQ9NP74 551 aa12.03□□□□□ -0.48
UPK3A-201ENST00000216211 TRAV1-2A0A0B4J238 106 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 SHISA3A0PJX4 238 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 OR4C45A6NMZ5 311 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 FAM90A22PA8MWA6 464 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 SH2D1BO14796 132 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 OCM2P0CE71 109 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 OCMP0CE72 109 aaPredicted RBP12.02□□□□□ -0.49
UPK3A-201ENST00000216211 CD24P25063 80 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 S100A5P33763 92 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 MXD1Q05195 221 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 SCN1BQ07699 218 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 ABHD12Q8N2K0 398 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 OR4F17Q8NGA8 305 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 OR5D18Q8NGL1 313 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 OR13C3Q8NGS6 347 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 OR13C9Q8NGT0 318 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 SPSB1Q96BD6 273 aa12.02□□□□□ -0.49
UPK3A-201ENST00000216211 OR4F4Q96R69 305 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms