RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Prr11Q8BHE0 368 aa12.58□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Csnk1g2Q8BVP5 415 aa12.58□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Pqlc2Q8C4N4 293 aa12.58□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Amdhd2Q8JZV7 409 aa12.58□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Psmb2Q9R1P3 201 aa12.58□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Igkv5-45A0A0B4J1J1 115 aa12.58□□□□□ -0.4
Col3a1-201ENSMUST00000087883 1700080E11RikE9Q9G1 206 aa12.58□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Dlx4P70436 240 aa12.58□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Ndufb6Q3UIU2 128 aa12.58□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Tmem211Q3UUA0 195 aa12.58□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Olfr763Q8VGC1 309 aa12.58□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Scgb1b15A0A087WP50 93 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Prr23a2D3YWX5 253 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Itln1O88310 313 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Hist1h1aP43275 213 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 XylbQ3TNA1 551 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Wdfy2Q8BUB4 400 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 MdficQ8BX65 247 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Fzd2Q9JIP6 570 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 CN725425A0A087WRU1 652 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Gm4177D3YTX5 305 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Zfp229E9PWT2 705 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Vmn1r7E9Q8T0 311 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Vmn1r103K7N6X7 305 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Olfr1154L7MU57 310 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Vmn1r151L7N288 305 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 EllO08856 602 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Fgf2P15655 154 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Tas2r41P59532 308 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Samd12Q0VE29 161 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 D17Wsu92eQ3TT38 291 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Sec14l3Q5SQ27 401 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 LmlnQ8BMN4 681 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 6030452D12RikQ8CD33 222 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Olfr1443Q8VFW8 312 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Plekha2Q9ERS5 425 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 A730046J19RikA0A1B0GSN8 89 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Vmn1r138D3YTY2 306 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Gm8693E9PW18 306 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Gm4498K9J7G4 306 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Vmn1r118L7N273 306 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 VegfbP49766 207 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 PilrbQ2YFS2 224 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Hand1Q64279 216 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Neil2Q6R2P8 329 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Crb2Q80YA8 1282 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Gm11541Q8C4D8 108 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Commd5Q8R395 224 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Mrm2Q9CPY0 246 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Dtwd2Q9D0U1 298 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Pus1Q9WU56 423 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Adam10O35598 749 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 TigitP86176 249 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Rbp2Q08652 134 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 4930512M02RikQ5SQK8 218 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Fam189a1Q6A044 515 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 PirtQ8BFY0 135 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 SdhaQ8K2B3 664 aaKnown RBP12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 RnasekQ8K3C0 98 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Q9CQ90 155 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Wdr20Q9D5R2 567 aa12.57□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Gm5890A0A140LI04 305 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Nanos3P60324 178 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Isoc2aP85094 206 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Pitx2P97474 317 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Lhfpl5Q4KL25 219 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Ykt6Q9CQW1 198 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Arl13aQ9D416 372 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Derl3Q9D8K3 228 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Tmem225Q9D9S2 230 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Ighv5-2A0A0A6YVX8 117 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 TectbO08524 329 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 P2rx6O54803 389 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Egr3P43300 387 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Olfr1229Q7TQZ9 311 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Tmem56Q8CGF5 276 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Mrps30Q9D0G0 442 aaKnown RBP12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Ighv1-78A0A0G2JGN3 117 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Samt1A2BED8 237 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Hoxa1P09022 331 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 St8sia5P70126 412 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Cxcl3Q6W5C0 100 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Vma21Q78T54 101 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Pias2Q8C5D8 621 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Rdh9Q8K5C8 317 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Defb35Q8R2I3 63 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Susd5G3UW60 619 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 FasP25446 327 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Gsx2P31316 305 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Olfr145Q60882 310 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Ikzf4Q8C208 586 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 MetrnlQ8VE43 311 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Olfr137Q8VFC2 312 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Ms4a6bQ99N09 244 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Elovl1Q9JLJ5 279 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Vsig2Q9Z109 328 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Vmn1r34G3XA52 309 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Twist1P26687 206 aa12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 JPT1P97825 154 aaKnown RBP12.56□□□□□ -0.4
Col3a1-201ENSMUST00000087883 Ceacam12Q3UKP4 300 aa12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms