RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 SLIRPQ9GZT3 109 aaKnown RBP7.01□□□□□ -1.29
CDKL5-209ENST00000635828 MIXL1Q9H2W2 232 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 KIF25Q9UIL4 384 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 PDCD5O14737 125 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 LMO1P25800 156 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 SLC36A1Q7Z2H8 476 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 MRGPRDQ8TDS7 321 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 FOXRED1Q96CU9 486 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-209ENST00000635828 RSL24D1Q9UHA3 163 aaKnown RBP7.01□□□□□ -1.29
CDKL5-209ENST00000635828 IGHV4-38-2P0DP08 117 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 ELK1P19419 428 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 CHATP28329 748 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 RPL31P62899 125 aaKnown RBP7.01□□□□□ -1.29
CDKL5-209ENST00000635828 GUCA2AQ02747 115 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 KRBOX4Q5JUW0 171 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 SPIN3Q5JUX0 258 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 CLEC9AQ6UXN8 241 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 Q8IYB0 196 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 TAF15Q92804 592 aaKnown RBP eCLIP7.01□□□□□ -1.29
CDKL5-209ENST00000635828 TMEM186Q96B77 213 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 ONECUT1Q9UBC0 465 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 OPN4Q9UHM6 478 aa7.01□□□□□ -1.29
CDKL5-209ENST00000635828 IGKV1D-8A0A087WSZ0 117 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 MEIOCA2RUB1 952 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 RNASE12Q5GAN4 147 aaKnown RBP7□□□□□ -1.29
CDKL5-209ENST00000635828 RSBN1Q5VWQ0 802 aaPredicted RBP7□□□□□ -1.29
CDKL5-209ENST00000635828 RUSC1-AS1Q66K80 236 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 BRD3OSQ6XYD6 125 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 USP43Q70EL4 1123 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 NLRC3Q7RTR2 1065 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 LINC01356Q8N9X3 169 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 KCNG3Q8TAE7 436 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 NEK7Q8TDX7 302 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 THRSPQ92748 146 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 YAE1D1Q9NRH1 226 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 AK3Q9UIJ7 227 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 PPIAL4CA0A0B4J2A2 164 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 TMEM235A6NFC5 223 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 B4DSR2 109 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 CHRM2P08172 466 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 PPIAL4GP0DN37 164 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 CDK2P24941 298 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 LRRC10Q5BKY1 277 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 CDH26Q8IXH8 852 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 CREB3L1Q96BA8 519 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 NUDT16L1Q9BRJ7 211 aaKnown RBP7□□□□□ -1.29
CDKL5-209ENST00000635828 CST11Q9H112 138 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 RCC2Q9P258 522 aaKnown RBP7□□□□□ -1.29
CDKL5-209ENST00000635828 TENM1Q9UKZ4 2725 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 IGHV3-43A0A0B4J1X8 118 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 IGHV2-70DA0A0C4DH43 119 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 IFNL4K9M1U5 179 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 IGHV3-43DP0DP04 118 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 CFPP27918 469 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 KLF17Q5JT82 389 aaPredicted RBP7□□□□□ -1.29
CDKL5-209ENST00000635828 LDLRAD2Q5SZI1 272 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 GDPD3Q7L5L3 318 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 BCL6BQ8N143 479 aaPredicted RBP7□□□□□ -1.29
CDKL5-209ENST00000635828 FAM89BQ8N5H3 189 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 CHST4Q8NCG5 386 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 NUDCD2Q8WVJ2 157 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 TM2D1Q9BX74 207 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 PECRQ9BY49 303 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 C7orf69Q9H7B7 122 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 RHBDL2Q9NX52 303 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 SPATA2Q9UM82 520 aa7□□□□□ -1.29
CDKL5-209ENST00000635828 MEIKINA0A087WXM9 373 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 A0A1W2PPE3 182 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 A0A1W2PQ09 198 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 A6NHS1 94 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 NKX6-3A6NJ46 265 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 RORCP51449 518 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 DCAF12L2Q5VW00 463 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 GVQW1Q8N7I0 195 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 RAB40AQ8WXH6 277 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 RAB39BQ96DA2 213 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 SNX22Q96L94 193 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 C6orf62Q9GZU0 229 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-209ENST00000635828 PLEKHJ1Q9NW61 149 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 MDFIC2A0A1B0GVS7 189 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 ZNF780AO75290 641 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-209ENST00000635828 MMP9P14780 707 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 CR1LQ2VPA4 569 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 NHLRC3Q5JS37 347 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 PRAMEF5Q5TYX0 476 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 CYB5R2Q6BCY4 276 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 CPNE2Q96FN4 548 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-209ENST00000635828 TBX15Q96SF7 602 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 PARP12Q9H0J9 701 aaKnown RBP6.99□□□□□ -1.29
CDKL5-209ENST00000635828 INSIG2Q9Y5U4 225 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 RGS5O15539 181 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 CLPXO76031 633 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 FSTL3O95633 263 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 GLP1RP43220 463 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 C17orf58Q2M2W7 97 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 Q6ZTK2 550 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 LY6G5BQ8NDX9 201 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 C1orf159Q96HA4 380 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 MED30Q96HR3 178 aa6.99□□□□□ -1.29
CDKL5-209ENST00000635828 MRPS7Q9Y2R9 242 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms