RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CRYM-AS1A6NIL9 109 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 H0YL77 283 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 TM4SF5O14894 197 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 TNFSF12O43508 249 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 CST4P01036 141 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 UBA52P62987 128 aaKnown RBP10.6□□□□□ -0.71
CIITA-212ENST00000618207 CLCF1Q9UBD9 225 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 KCNIP3Q9Y2W7 256 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 CDIPTO14735 213 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 RRP8O43159 456 aaKnown RBP10.59□□□□□ -0.71
CIITA-212ENST00000618207 PPP1CBP62140 327 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 GNG3P63215 75 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 ZNF273Q14593 569 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 OR2A2Q6IF42 318 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 PRSS33Q8NF86 280 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 TMED6Q8WW62 240 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 KCNMB2Q9Y691 235 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 SIRPB1O00241 398 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 PPYP01298 95 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 SPTA1P02549 2419 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 GLAP06280 429 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 ZNF14P17017 642 aaPredicted RBP10.59□□□□□ -0.71
CIITA-212ENST00000618207 PCP4P48539 62 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 MEOX2P50222 304 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 AKR1C2P52895 323 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 AKR1C1Q04828 323 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 ZNF345Q14585 488 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 SURF2Q15527 256 aaPredicted RBP10.59□□□□□ -0.71
CIITA-212ENST00000618207 DHRS11Q6UWP2 260 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 SUMF2Q8NBJ7 301 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 REG4Q9BYZ8 158 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 FAM117AQ9C073 453 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 COA4Q9NYJ1 87 aa10.59□□□□□ -0.71
CIITA-212ENST00000618207 K7EM74 188 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 HSD17B6O14756 317 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 KLK10O43240 276 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 SMPD2O60906 423 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 LRP3O75074 770 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 SS18L1O75177 396 aaPredicted RBP10.58□□□□□ -0.72
CIITA-212ENST00000618207 NXPH3O95157 252 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 IFNA21P01568 189 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 TFF1P04155 84 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 FABP1P07148 127 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 HOXC12P31275 282 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 NUP62P37198 522 aaPredicted RBP10.58□□□□□ -0.72
CIITA-212ENST00000618207 KIR2DL2P43627 348 aaPredicted RBP10.58□□□□□ -0.72
CIITA-212ENST00000618207 CEBPDP49716 269 aaPredicted RBP10.58□□□□□ -0.72
CIITA-212ENST00000618207 FABP6P51161 128 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 BTN1A1Q13410 526 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 SNTB1Q13884 538 aaKnown RBP10.58□□□□□ -0.72
CIITA-212ENST00000618207 FAM58AQ8N1B3 248 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 POC1AQ8NBT0 407 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 OPN3Q9H1Y3 402 aaPredicted RBP10.58□□□□□ -0.72
CIITA-212ENST00000618207 OR14J1Q9UGF5 321 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 SMG1Q96Q15 3661 aaKnown RBP10.58□□□□□ -0.72
CIITA-212ENST00000618207 MPV17P39210 176 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 TMEM211Q6ICI0 200 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 ZNF826PQ6ZT77 177 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 WDR86Q86TI4 376 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 ZNF573Q86YE8 665 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 RPRMLQ8N4K4 120 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 NARS2Q96I59 477 aaKnown RBP10.58□□□□□ -0.72
CIITA-212ENST00000618207 MS4A7Q9GZW8 240 aaPredicted RBP10.58□□□□□ -0.72
CIITA-212ENST00000618207 NAA60Q9H7X0 242 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 POLEQ07864 2286 aa10.58□□□□□ -0.72
CIITA-212ENST00000618207 SNAPC5O75971 98 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 HERPUD1Q15011 391 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 GABRA6Q16445 453 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 PRSS54Q6PEW0 395 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 ZNF610Q8N9Z0 462 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 TP53RKQ96S44 253 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 OBP2BQ9NPH6 170 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 UFSP2Q9NUQ7 469 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 TAS2R3Q9NYW6 316 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 IGKV1D-13A0A0B4J2D9 117 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 MFSD2BA6NFX1 497 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 IGHG3P01860 377 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 IGKV1-13P0DP09 117 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 PSG7Q13046 419 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 MRPL49Q13405 166 aaKnown RBP10.57□□□□□ -0.72
CIITA-212ENST00000618207 TUSC1Q2TAM9 212 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 Q6ZT83 130 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 STPG2Q8N412 459 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 GLYATL2Q8WU03 294 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 SARAFQ96BY9 339 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 PIK3IP1Q96FE7 263 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 ADAT1Q9BUB4 502 aaKnown RBP10.57□□□□□ -0.72
CIITA-212ENST00000618207 ASF1BQ9NVP2 202 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 DLL3Q9NYJ7 618 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 RASL12Q9NYN1 266 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 CBY1Q9Y3M2 126 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 MPC1Q9Y5U8 109 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 CHD3Q12873 2000 aaKnown RBP10.57□□□□□ -0.72
CIITA-212ENST00000618207 ADGRG4Q8IZF6 3080 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 TRAV24A0A0B4J272 114 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 FBXO24O75426 580 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 TK1P04183 234 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 UCP2P55851 309 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 PLEKHN1Q494U1 663 aaPredicted RBP10.57□□□□□ -0.72
CIITA-212ENST00000618207 SCCPDHQ8NBX0 429 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms