RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 YIPF6Q96EC8 236 aa11.61□□□□□ -0.55
SHKBP1-217ENST00000598558 AJUBAQ96IF1 538 aa11.61□□□□□ -0.55
SHKBP1-217ENST00000598558 MDFIQ99750 246 aa11.61□□□□□ -0.55
SHKBP1-217ENST00000598558 DPCDQ9BVM2 203 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-217ENST00000598558 MS4A7Q9GZW8 240 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-217ENST00000598558 METTL8Q9H825 291 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-217ENST00000598558 V9GY05 133 aa11.61□□□□□ -0.55
SHKBP1-217ENST00000598558 FBN1P35555 2871 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-217ENST00000598558 A0A0B4J203 849 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 hADV38S2A0JD32 116 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 ODAMA1E959 279 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 MPIG6BO95866 241 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 IFNA2P01563 188 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 CLEC2LP0C7M8 214 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 TGFBR1P36897 503 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 C17orf58Q2M2W7 97 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 KRBOX4Q5JUW0 171 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 HES5Q5TA89 166 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 GPR157Q5UAW9 335 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 ZNF782Q6ZMW2 699 aaPredicted RBP11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 ZDHHC22Q8N966 263 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 OR51D1Q8NGF3 324 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 OR6M1Q8NGM8 313 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 OR13A1Q8NGR1 328 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 PPP1R35Q8TAP8 253 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 C17orf50Q8WW18 174 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 CORO2AQ92828 525 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 MRPS24Q96EL2 167 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 CHCHD6Q9BRQ6 235 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 NICN1Q9BSH3 213 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 CENPOQ9BU64 300 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 RCC2Q9P258 522 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 GHRLQ9UBU3 117 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 KIF25Q9UIL4 384 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 LINC00312Q9Y6C7 94 aa11.6□□□□□ -0.55
SHKBP1-217ENST00000598558 DOCK11Q5JSL3 2073 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 A0A0U1RQK1 487 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 LDLRAD4O15165 306 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 SLC2A2P11168 524 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 FPR2P25090 351 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 PAX6P26367 422 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 RPS27AP62979 156 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 MPV17LQ2QL34 196 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 C2orf76Q3KRA6 126 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 KRTAP21-3Q3LHN1 58 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 LDLRAD2Q5SZI1 272 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 ATAD3CQ5T2N8 411 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 C5orf24Q7Z6I8 188 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 DYRK2Q92630 601 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 LPAR5Q9H1C0 372 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 PLGRKTQ9HBL7 147 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 PCDHB16Q9NRJ7 776 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 SSR3Q9UNL2 185 aa11.59□□□□□ -0.55
SHKBP1-217ENST00000598558 TCF21O43680 179 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 BPNT1O95861 308 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 UBBP0CG47 229 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 IGHV1-8P0DP01 117 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 RAB3BP20337 219 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 OMGP23515 440 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 COX7A1P24310 79 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 UBE2E1P51965 193 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 EFNB2P52799 333 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 HILS1P60008 231 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 BLMHQ13867 455 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 RAB11BQ15907 218 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 KRTAP24-1Q3LI83 254 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 LINC00596Q86U02 117 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 FAM3DQ96BQ1 224 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 ZNF714Q96N38 554 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 DUX5Q96PT3 197 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 TM2D1Q9BX74 207 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 PRDM13Q9H4Q3 707 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 PEX16Q9Y5Y5 336 aa11.58□□□□□ -0.56
SHKBP1-217ENST00000598558 MEIKINA0A087WXM9 373 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 LOC100506127A0A0U1RQW1 187 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 TMEM272A0A1B0GTI8 110 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 UBE2QL1A1L167 161 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 IFITM5A6NNB3 132 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 FOXI3A8MTJ6 420 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 NPFFO15130 113 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 SOCS1O15524 211 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 MT-ND4P03905 459 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 ARSBP15848 533 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 MYL9P24844 172 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 SDC2P34741 201 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 TMEM50BP56557 158 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 PAX5Q02548 391 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 PRAMEF5Q5TYX0 476 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 SLC35E4Q6ICL7 350 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 RAB12Q6IQ22 244 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 FAM53AQ6NSI3 398 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 USP43Q70EL4 1123 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 KCNG3Q8TAE7 436 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 ZNF418Q8TF45 676 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 SUCNR1Q9BXA5 334 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 NCOR1P1Q9H4R4 102 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 STEAP1Q9UHE8 339 aa11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 UBE2J1Q9Y385 318 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-217ENST00000598558 TRGV10A0A0A0MS01 117 aa11.56□□□□□ -0.56
SHKBP1-217ENST00000598558 A0A1W2PPH5 198 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms