RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ZMAT4Q9H898 229 aa9.96□□□□□ -0.82
PRKCSH-210ENST00000589990 CLN6Q9NWW5 311 aa9.96□□□□□ -0.82
PRKCSH-210ENST00000589990 WARS2Q9UGM6 360 aaKnown RBP9.96□□□□□ -0.82
PRKCSH-210ENST00000589990 NUFIP1Q9UHK0 495 aaKnown RBP9.96□□□□□ -0.82
PRKCSH-210ENST00000589990 LAMP5Q9UJQ1 280 aa9.96□□□□□ -0.82
PRKCSH-210ENST00000589990 GTF2A1LQ9UNN4 478 aa9.96□□□□□ -0.82
PRKCSH-210ENST00000589990 SLC7A11Q9UPY5 501 aa9.96□□□□□ -0.82
PRKCSH-210ENST00000589990 UBE2J1Q9Y385 318 aaPredicted RBP9.96□□□□□ -0.82
PRKCSH-210ENST00000589990 ACOD1A6NK06 481 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 SNTNA6NMZ2 147 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 TOR1AO14656 332 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 SPNP16150 400 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 HTR1FP30939 366 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 CAPGP40121 348 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 CEACAM3P40198 252 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 MNDAP41218 407 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 CDX1P47902 265 aaPredicted RBP9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 AQP4P55087 323 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 AESQ08117 197 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 UBE2V2Q15819 145 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 PNLIPRP3Q17RR3 467 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 SLC25A30Q5SVS4 291 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 ZNF691Q5VV52 312 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 SLC25A26Q70HW3 274 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 THNSL2Q86YJ6 484 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 SETD9Q8NE22 299 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 OR11H1Q8NG94 326 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 ISOC1Q96CN7 298 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 CNN2Q99439 309 aaKnown RBP9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 ING3Q9NXR8 418 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 PCLOQ9Y6V0 5065 aa9.95□□□□□ -0.82
PRKCSH-210ENST00000589990 MGST3O14880 152 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 APOL3O95236 402 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 IGKV1D-33P01593 117 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 IGKV1-33P01594 117 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 BCL3P20749 454 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 ERP29P30040 261 aaKnown RBP9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 GPR12P47775 334 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 TMED1Q13445 227 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 GPR50Q13585 617 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 C17orf58Q2M2W7 97 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 CXorf66Q5JRM2 361 aaPredicted RBP9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 OR52W1Q6IF63 320 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 FOXRED2Q8IWF2 684 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 RNF152Q8N8N0 203 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 TOMM40LQ969M1 308 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 RNFT2Q96EX2 444 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 YIPF3Q9GZM5 350 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 GAL3ST2Q9H3Q3 398 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 ADGRL4Q9HBW9 690 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 AMBNQ9NP70 447 aa9.94□□□□□ -0.82
PRKCSH-210ENST00000589990 A0A087X0M5 115 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 TRGV10A0A0A0MS01 117 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 A0A1B0GX30 115 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 OOSP1A8MZH6 123 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 H0YJX3 145 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 CCRL2O00421 344 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 FGF16O43320 207 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 GNAO1P09471 354 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 GABRB1P18505 474 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 NFYBP25208 207 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 VHLP40337 213 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 CFHR3Q02985 330 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 ROM1Q03395 351 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 ODF4Q2M2E3 257 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 CCDC144NLQ6NUI1 221 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 IZUMO2Q6UXV1 221 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 SLC35F2Q8IXU6 374 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 C8orf59Q8N0T1 100 aaPredicted RBP9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 C4orf3Q8WVX3 66 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 CORO2AQ92828 525 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 RPEQ96AT9 228 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 COQ2Q96H96 371 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 OR5B12Q96R08 314 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 TBX5Q99593 518 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 MROQ9BYG7 248 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 GNB4Q9HAV0 340 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 ISYNA1Q9NPH2 558 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 TMEM14AQ9Y6G1 99 aa9.93□□□□□ -0.82
PRKCSH-210ENST00000589990 IGHV3-72A0A0B4J1Y9 119 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 ZNF670-ZNF695F2Z2N8 137 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 LOC110117498-PIK3R3F6TDL0 507 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 AP4M1O00189 453 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 OR2H2O95918 312 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 GP9P14770 177 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 PRKACAP17612 351 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 PRRX1P54821 245 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 ISL1P61371 349 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 GNB1P62873 340 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 FOXE3Q13461 319 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 SRSF7Q16629 238 aaKnown RBP eCLIP9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 ZNF829Q3KNS6 432 aaPredicted RBP9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 DEGS2Q6QHC5 323 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 Q6ZSR3 168 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 CATSPERDQ86XM0 798 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 ZNF679Q8IYX0 411 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 ELMOD2Q8IZ81 293 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 FAM58AQ8N1B3 248 aa9.92□□□□□ -0.82
PRKCSH-210ENST00000589990 OR10H4Q8NGA5 316 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms