RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 TBC1D28Q2M2D7 210 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 PHLDA2Q53GA4 152 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 SPIN3Q5JUX0 258 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 DHRS7BQ6IAN0 325 aaPredicted RBP6.17□□□□□ -1.42
SPIDR-228ENST00000588781 SPINK14Q6IE38 97 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 BTNL8Q6UX41 500 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 TUSC5Q8IXB3 177 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 TMEM251Q8N6I4 163 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 OR4A4PQ8NGN8 299 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 MSI2Q96DH6 328 aaKnown RBP6.17□□□□□ -1.42
SPIDR-228ENST00000588781 GNPNAT1Q96EK6 184 aaPredicted RBP6.17□□□□□ -1.42
SPIDR-228ENST00000588781 TMEM56Q96MV1 263 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 NRIP2Q9BQI9 281 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 RTL8AQ9BWD3 113 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 TMEM222Q9H0R3 208 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 HRH4Q9H3N8 390 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 IFT22Q9H7X7 185 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 PLEKHF2Q9H8W4 249 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 UNKLQ9H9P5 680 aaKnown RBP6.17□□□□□ -1.42
SPIDR-228ENST00000588781 TUBG2Q9NRH3 451 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 TREM2Q9NZC2 230 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 PRELID1Q9Y255 219 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 ATP23Q9Y6H3 246 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 TMEM56-RWDD3S4R434 201 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 AKAP13Q12802 2813 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 EML6Q6ZMW3 1958 aa6.17□□□□□ -1.42
SPIDR-228ENST00000588781 TRGV5A0A0B4J1U4 118 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.16□□□□□ -1.42
SPIDR-228ENST00000588781 A0A1B0GW64 132 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 PINLYPA6NC86 204 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 CD300LBA8K4G0 201 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 FAM166BA8MTA8 275 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 RNF212BA8MTL3 300 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 H0Y980 276 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 J3QT63 122 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 SS18L1O75177 396 aaPredicted RBP6.16□□□□□ -1.42
SPIDR-228ENST00000588781 PITX3O75364 302 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 DFFBO76075 338 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 NAPSAO96009 420 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 HBE1P02100 147 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 PRH1P02810 166 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 HEXAP06865 529 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 DANCRP0C864 163 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 BCL3P20749 454 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 VDAC1P21796 283 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 CCNOP22674 350 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 ANOS1P23352 680 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 NTF4P34130 210 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 CD200P41217 278 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 KCNJ3P48549 501 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 GPM6AP51674 278 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 HLA-DRB3P79483 266 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 MZT1Q08AG7 82 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 GABRA6Q16445 453 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 SMUG1Q53HV7 270 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 SHEQ5VZ18 495 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 DPPA3Q6W0C5 159 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 Q6ZRG5 221 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 P4HA3Q7Z4N8 544 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 C1orf174Q8IYL3 243 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 CPEB3Q8NE35 698 aaKnown RBP6.16□□□□□ -1.42
SPIDR-228ENST00000588781 OR5D13Q8NGL4 314 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 OR4D5Q8NGN0 318 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 OR1K1Q8NGR3 316 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 FGFBP3Q8TAT2 258 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 SLAMF9Q96A28 289 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 AKR1E2Q96JD6 320 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 POM121L2Q96KW2 1035 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 MS4A7Q9GZW8 240 aaPredicted RBP6.16□□□□□ -1.42
SPIDR-228ENST00000588781 CDH20Q9HBT6 801 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 SMCO4Q9NRQ5 59 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 PRR13Q9NZ81 148 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 MLXQ9UH92 298 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 RCL1Q9Y2P8 373 aaKnown RBP6.16□□□□□ -1.42
SPIDR-228ENST00000588781 AMDHD2Q9Y303 409 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 PRELID3BQ9Y3B1 194 aa6.16□□□□□ -1.42
SPIDR-228ENST00000588781 HELZ2Q9BYK8 2649 aaKnown RBP6.15□□□□□ -1.42
SPIDR-228ENST00000588781 NCOA6Q14686 2063 aaPredicted RBP6.15□□□□□ -1.42
SPIDR-228ENST00000588781 A0A1B0GU03 582 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 CLEC18AA5D8T8 446 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 SLC22A20A6NK97 555 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 TMEM210A6NLX4 147 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 NPIPB11E5RHQ5 1161 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 ATP6V1G2-DDX39BF2Z307 99 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 TUSC2O75896 110 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 SCAF4O95104 1147 aaKnown RBP6.15□□□□□ -1.42
SPIDR-228ENST00000588781 CNOT4O95628 575 aaKnown RBP6.15□□□□□ -1.42
SPIDR-228ENST00000588781 HLA-HP01893 362 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 CD5P06127 495 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 H2AFB1P0C5Y9 115 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 SFTA3P0C7M3 94 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 SPP1P10451 314 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 PRKACAP17612 351 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 UCP1P25874 307 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 PAX6P26367 422 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 GNRHRP30968 328 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 MAGEA5P43359 124 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 LPAR6P43657 344 aa6.15□□□□□ -1.42
SPIDR-228ENST00000588781 UBE2NP61088 152 aaKnown RBP6.15□□□□□ -1.42
SPIDR-228ENST00000588781 RPL23AP62750 156 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms