RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 SSPNQ14714 243 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 ICAM4Q14773 271 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 C21orf62-AS1Q17RA5 79 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.53□□□□□ -1.36
TVP23C-208ENST00000581273 DEFB109BQ30KR1 87 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 C1orf140Q5VVS0 124 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 CDPF1Q6NVV7 123 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 ARMC6Q6NXE6 501 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 RNF44Q7L0R7 432 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 DTX1Q86Y01 620 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 LYPD6Q86Y78 171 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 THNSL2Q86YJ6 484 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 FOXRED2Q8IWF2 684 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 GVQW1Q8N7I0 195 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 OR4X1Q8NH49 305 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 ZNRF4Q8WWF5 429 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 SMIM10Q96HG1 83 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 SNX22Q96L94 193 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 CCDC74BQ96LY2 380 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 AGMATQ9BSE5 352 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 TMEM59Q9BXS4 323 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 AICDAQ9GZX7 198 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 CNTD2Q9H8S5 307 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 ZMAT3Q9HA38 289 aaKnown RBP6.53□□□□□ -1.36
TVP23C-208ENST00000581273 MMP25Q9NPA2 562 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 PHPT1Q9NRX4 125 aaPredicted RBP6.53□□□□□ -1.36
TVP23C-208ENST00000581273 NAT8Q9UHE5 227 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 NAGKQ9UJ70 344 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 ZFP30Q9Y2G7 519 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 HS3ST3B1Q9Y662 390 aa6.53□□□□□ -1.36
TVP23C-208ENST00000581273 FBN1P35555 2871 aaKnown RBP6.53□□□□□ -1.36
TVP23C-208ENST00000581273 DIDO1Q9BTC0 2240 aaKnown RBP6.53□□□□□ -1.36
TVP23C-208ENST00000581273 ZNF469Q96JG9 3925 aaPredicted RBP6.53□□□□□ -1.36
TVP23C-208ENST00000581273 TRAV36DV7A0A075B6V5 113 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 IGKV1-8A0A0C4DH67 115 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 IGHV5-10-1A0A0J9YXX1 117 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 CENPVL1A0A0U1RR11 272 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 C20orf202A1L168 122 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 PRSS37A4D1T9 235 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 ZNF891A8MT65 544 aaPredicted RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 ZNF727A8MUV8 499 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 KCNAB3O43448 404 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 MMP23AO75900 390 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 SCGB1D1O95968 90 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 SCGB1D2O95969 90 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 IFNA5P01569 189 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 IGHMP01871 453 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 TYMSP04818 313 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 SNRPCP09234 159 aaKnown RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 H2BFMP0C1H6 154 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 PGA4P0DJD7 388 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 PGA3P0DJD8 388 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 PGA5P0DJD9 388 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 FGF5P12034 268 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 GNB3P16520 340 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 GNLYP22749 145 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 GALNSP34059 522 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 ZNF93P35789 620 aaPredicted RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 APOBEC1P41238 236 aaKnown RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 CDKN1BP46527 198 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 GNG10P50151 68 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 EMDP50402 254 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 SNU13P55769 128 aaKnown RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 RPS20P60866 119 aaKnown RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 RPL27P61353 136 aaKnown RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 RPL19P84098 196 aaKnown RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 RPL18Q07020 188 aaKnown RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 KIR2DS3Q14952 304 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 KCNMB1Q16558 191 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 ODF4Q2M2E3 257 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 PRICKLE4Q2TBC4 344 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 LEMD1Q68G75 181 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 ZNF774Q6NX45 483 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 OGFOD3Q6PK18 319 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 PET117Q6UWS5 81 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 PLXDC2Q6UX71 529 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 TIPARPQ7Z3E1 657 aaKnown RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 ATG4DQ86TL0 474 aaPredicted RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 CMTM1Q8IZ96 169 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 LINC01555Q8NAE3 123 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 OR5T1Q8NG75 326 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 OR4D6Q8NGJ1 314 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 OR13G1Q8NGZ3 307 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 CLDND2Q8NHS1 167 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 ZPLD1Q8TCW7 415 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 MRGPRDQ8TDS7 321 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 PTPMT1Q8WUK0 201 aaPredicted RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 ORAOV1Q8WV07 137 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 MRPL24Q96A35 216 aaKnown RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 RERGQ96A58 199 aaPredicted RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 ZNF775Q96BV0 537 aaPredicted RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 CTHRC1Q96CG8 243 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 TECTBQ96PL2 329 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 TSPAN32Q96QS1 320 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 HIST1H2AAQ96QV6 131 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 ZNF2Q9BSG1 426 aaPredicted RBP6.52□□□□□ -1.37
TVP23C-208ENST00000581273 OR10A2Q9H208 303 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 NAA60Q9H7X0 242 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 FGF22Q9HCT0 170 aa6.52□□□□□ -1.37
TVP23C-208ENST00000581273 DECR2Q9NUI1 292 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms