RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 SIRPB1O00241 398 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 SOCS1O15524 211 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 PSPNO60542 156 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 HPGDSO60760 199 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 TMEM127O75204 238 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 ZNF737O75373 536 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 ECDO95905 644 aaPredicted RBP7.75□□□□□ -1.17
UBR1-210ENST00000569337 OR2H2O95918 312 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 HAND1O96004 215 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 KNG1P01042 644 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 ELK1P19419 428 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 RAB6AP20340 208 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 PRDX2P32119 198 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 SOX6P35712 828 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 VEGFCP49767 419 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 BMXP51813 675 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 CAPZA1P52907 286 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 TMEM50BP56557 158 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 SCAND1P57086 179 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 COL10A1Q03692 680 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 IL13RA2Q14627 380 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 C11orf91Q3C1V1 193 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 SPIN3Q5JUX0 258 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 ATPAF1Q5TC12 328 aaPredicted RBP7.75□□□□□ -1.17
UBR1-210ENST00000569337 BRICD5Q6PL45 260 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 ZNF788Q6ZQV5 615 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 BTN2A1Q7KYR7 527 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 SAMD12Q8N8I0 201 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 DTX3Q8N9I9 347 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 MCFD2Q8NI22 146 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 ST8SIA4Q92187 359 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 PTX4Q96A99 478 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 UPRTQ96BW1 309 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 MRPS24Q96EL2 167 aaKnown RBP7.75□□□□□ -1.17
UBR1-210ENST00000569337 SDSLQ96GA7 329 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 RHBDL2Q9NX52 303 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 ETV7Q9Y603 341 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 COL6A5A8TX70 2615 aa7.75□□□□□ -1.17
UBR1-210ENST00000569337 TRAV40A0A0B4J280 105 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 SLC33A1O00400 549 aaPredicted RBP7.74□□□□□ -1.17
UBR1-210ENST00000569337 SH2D1BO14796 132 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 NDUFB3O43676 98 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 OR7C1O76099 320 aaPredicted RBP7.74□□□□□ -1.17
UBR1-210ENST00000569337 TOX4O94842 621 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 IGHV4-38-2P0DP08 117 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 GABRR1P24046 479 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 LMO1P25800 156 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 GABRA2P47869 451 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 ACTG1P63261 375 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 SCN1BQ07699 218 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 DYNC1I2Q13409 638 aaKnown RBP7.74□□□□□ -1.17
UBR1-210ENST00000569337 IKZF1Q13422 519 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 PLAC9Q5JTB6 97 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 UBE2NLQ5JXB2 153 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 GPR157Q5UAW9 335 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 LAX1Q8IWV1 398 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 BCL6BQ8N143 479 aaPredicted RBP7.74□□□□□ -1.17
UBR1-210ENST00000569337 SIGLECL1Q8N7X8 197 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.74□□□□□ -1.17
UBR1-210ENST00000569337 ZNRF1Q8ND25 227 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 OR4S1Q8NGB4 309 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 ACOT12Q8WYK0 555 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 MED30Q96HR3 178 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 PCGF1Q9BSM1 259 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 C6orf62Q9GZU0 229 aaPredicted RBP7.74□□□□□ -1.17
UBR1-210ENST00000569337 DNTTIP1Q9H147 329 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 ABCG5Q9H222 651 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 IFT22Q9H7X7 185 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 SEBOXQ9HB31 216 aaPredicted RBP7.74□□□□□ -1.17
UBR1-210ENST00000569337 PCDHB16Q9NRJ7 776 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 RCC2Q9P258 522 aaKnown RBP7.74□□□□□ -1.17
UBR1-210ENST00000569337 ELF5Q9UKW6 265 aaPredicted RBP7.74□□□□□ -1.17
UBR1-210ENST00000569337 KCNK7Q9Y2U2 307 aa7.74□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A10PA6NDY2 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A18PA6NE21 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A16PA6NEW6 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A20PA6NIJ5 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 NKX6-3A6NJ46 265 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A8PA6NJQ4 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A7PA6NKC0 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A22PA8MWA6 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A12PA8MX19 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A5PA8MXJ8 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A23PA8MXZ1 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 HSPB6O14558 160 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 DEGS1O15121 323 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 SIGLEC5O15389 551 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 CHRM2P08172 466 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A15PP0C7V4 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A13PP0C7W8 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A14PP0C7W9 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 FAM90A24PP0C7X0 464 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 CDK2P24941 298 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 CHATP28329 748 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 BLVRBP30043 206 aaPredicted RBP7.73□□□□□ -1.17
UBR1-210ENST00000569337 OR3A1P47881 315 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 BPIFB3P59826 476 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 ARF6P62330 175 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 BAMBIQ13145 260 aa7.73□□□□□ -1.17
UBR1-210ENST00000569337 MADCAM1Q13477 382 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms