RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ERVFRD-1P60508 538 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 SCN1BQ07699 218 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 TAF9Q16594 264 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 TUSC1Q2TAM9 212 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 KRBOX4Q5JUW0 171 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 SLC35E4Q6ICL7 350 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 ZNF565Q8N9K5 539 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 SUMF2Q8NBJ7 301 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 TMEM104Q8NE00 496 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 FAM3DQ96BQ1 224 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 TBX15Q96SF7 602 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 CHCHD6Q9BRQ6 235 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 PCGF1Q9BSM1 259 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 CHST6Q9GZX3 395 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 PPA2Q9H2U2 334 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 HEXA-AS1Q9H8Q6 139 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 RAB9BQ9NP90 201 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 A0A1W2PP11 408 aa13.71□□□□□ -0.21
RNF40-206ENST00000564260 MCRIP1C9JLW8 97 aa13.71□□□□□ -0.21
RNF40-206ENST00000564260 PDCD6O75340 191 aa13.71□□□□□ -0.21
RNF40-206ENST00000564260 MPIG6BO95866 241 aa13.71□□□□□ -0.21
RNF40-206ENST00000564260 RAB6AP20340 208 aa13.71□□□□□ -0.21
RNF40-206ENST00000564260 EDDM3AQ14507 147 aa13.71□□□□□ -0.21
RNF40-206ENST00000564260 KLF17Q5JT82 389 aaPredicted RBP13.71□□□□□ -0.21
RNF40-206ENST00000564260 VMO1Q7Z5L0 202 aa13.71□□□□□ -0.21
RNF40-206ENST00000564260 GAPTQ8N292 157 aa13.71□□□□□ -0.21
RNF40-206ENST00000564260 FAM89BQ8N5H3 189 aa13.71□□□□□ -0.21
RNF40-206ENST00000564260 Q8N7P7 452 aa13.71□□□□□ -0.21
RNF40-206ENST00000564260 NKX3-1Q99801 234 aaPredicted RBP13.71□□□□□ -0.21
RNF40-206ENST00000564260 SUCNR1Q9BXA5 334 aa13.71□□□□□ -0.21
RNF40-206ENST00000564260 RAB22AQ9UL26 194 aa13.71□□□□□ -0.21
RNF40-206ENST00000564260 MXRA5Q9NR99 2828 aa13.71□□□□□ -0.22
RNF40-206ENST00000564260 LOC100506127A0A0U1RQW1 187 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 SHISA3A0PJX4 238 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 TMEM30CPA0ZSE6 113 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 LDLRAD4O15165 306 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 SCGNO76038 276 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 UBE2E1P51965 193 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 DLX6P56179 175 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 UNC119Q13432 240 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 KRTAP21-3Q3LHN1 58 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 TMEM30BQ3MIR4 351 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 OR52W1Q6IF63 320 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 TRAT1Q6PIZ9 186 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 ZNF554Q86TJ5 538 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 OR4M1Q8NGD0 313 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 OR10A7Q8NGE5 316 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 ZNF418Q8TF45 676 aaPredicted RBP13.7□□□□□ -0.22
RNF40-206ENST00000564260 TNFRSF14Q92956 283 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 COQ2Q96H96 371 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 NEDD4LQ96PU5 975 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 JMJD8Q96S16 334 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 BANF2Q9H503 90 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 LINC00574Q9H8X3 128 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 HSF4Q9ULV5 492 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 WNK2Q9Y3S1 2297 aa13.7□□□□□ -0.22
RNF40-206ENST00000564260 TRAV40A0A0B4J280 105 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 IGHV1-69DA0A0B4J2H0 117 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 ZNF729A6NN14 1252 aaPredicted RBP13.69□□□□□ -0.22
RNF40-206ENST00000564260 IL1AP01583 271 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 IGHV1-69P01742 117 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 GZMHP20718 246 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 SDC2P34741 201 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 ALDH3B2P48448 385 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 AESQ08117 197 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 ZNF273Q14593 569 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 ARL6IP1Q15041 203 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 C2orf76Q3KRA6 126 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 ATAD3CQ5T2N8 411 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 RSBN1Q5VWQ0 802 aaPredicted RBP13.69□□□□□ -0.22
RNF40-206ENST00000564260 RAB12Q6IQ22 244 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 SFXN4Q6P4A7 337 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 HEPN1Q6WQI6 88 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 IL17RELQ6ZVW7 336 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 BPIFB2Q8N4F0 458 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 C11orf42Q8N5U0 333 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 OR51D1Q8NGF3 324 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 OR56B1Q8NGI3 324 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 FAM46BQ96A09 425 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 CENPOQ9BU64 300 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 FUNDC2Q9BWH2 189 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 MS4A7Q9GZW8 240 aaPredicted RBP13.69□□□□□ -0.22
RNF40-206ENST00000564260 RIMS4Q9H426 269 aaPredicted RBP13.69□□□□□ -0.22
RNF40-206ENST00000564260 LIN7BQ9HAP6 207 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 PEX16Q9Y5Y5 336 aa13.69□□□□□ -0.22
RNF40-206ENST00000564260 CENPVL3A0A0U1RRI6 287 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 METTL21EPA6NDL7 271 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 CLPXO76031 633 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 GLIPR1P48060 266 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 ATXN7L3Q14CW9 347 aaPredicted RBP13.68□□□□□ -0.22
RNF40-206ENST00000564260 P2RY14Q15391 338 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 MIDNQ504T8 468 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 ZNF497Q6ZNH5 498 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 SLC16A12Q6ZSM3 486 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 TCF23Q7RTU1 214 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 TRAPPC6BQ86SZ2 158 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 ANKRD13BQ86YJ7 626 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 OR13D1Q8NGV5 346 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 BCL7BQ9BQE9 202 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 LPAR5Q9H1C0 372 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms