RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 MEIKINA0A087WXM9 373 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 FAM106CPP0CH98 169 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 CALCBP10092 127 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 GLP1RP43220 463 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 GLIPR1P48060 266 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 RAB13P51153 203 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 ATXN7L3Q14CW9 347 aaPredicted RBP11.33□□□□□ -0.6
TPM1-223ENST00000560445 HLA-DRB5Q30154 266 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 ZNF529Q6P280 563 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 Q6P435 159 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 REC114Q7Z4M0 266 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 DYNAPQ8N1N2 210 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 DHRSXQ8N5I4 330 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 OR51A2Q8NGJ7 313 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 OR51T1Q8NGJ9 327 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 CNIH3Q8TBE1 160 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 RPEQ96AT9 228 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 SMIM19Q96E16 107 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 SPACA1Q9HBV2 294 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 SERTAD4Q9NUC0 356 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 IL36GQ9NZH8 169 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 DIMT1Q9UNQ2 313 aaKnown RBP11.33□□□□□ -0.6
TPM1-223ENST00000560445 ZNF281Q9Y2X9 895 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 HSPE1-MOB4S4R3N1 261 aa11.33□□□□□ -0.6
TPM1-223ENST00000560445 GABRPO00591 440 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 OR2F2O95006 317 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 IGLV1-47P01700 117 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 LIMS3P0CW19 117 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 LIMS4P0CW20 117 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 PAX6P26367 422 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 BDKRB2P30411 391 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 ZNF93P35789 620 aaPredicted RBP11.32□□□□□ -0.6
TPM1-223ENST00000560445 RIPK1Q13546 671 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 MPV17LQ2QL34 196 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 YIF1BQ5BJH7 314 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 NHLRC3Q5JS37 347 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 STX19Q8N4C7 294 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 OR52N1Q8NH53 320 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 APH1BQ8WW43 257 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 COQ2Q96H96 371 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 NR1H4Q96RI1 486 aaPredicted RBP11.32□□□□□ -0.6
TPM1-223ENST00000560445 WNT10AQ9GZT5 417 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 MMP28Q9H239 520 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 IFT22Q9H7X7 185 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 BABAM2Q9NXR7 383 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 CALYQ9NYX4 217 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 FOXJ3Q9UPW0 622 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 KIAA2026Q5HYC2 2103 aa11.32□□□□□ -0.6
TPM1-223ENST00000560445 EFCAB10A6NFE3 127 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 E9PI62 339 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 BUB1B-PAK6H3BSN5 160 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 WBP4O75554 376 aaKnown RBP11.31□□□□□ -0.6
TPM1-223ENST00000560445 CLIC3O95833 236 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 IL1AP01583 271 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 LPLP06858 475 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 NFYBP25208 207 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 SOX2P48431 317 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 RAB7AP51149 207 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 MADCAM1Q13477 382 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 RBM39Q14498 530 aaKnown RBP11.31□□□□□ -0.6
TPM1-223ENST00000560445 RCN1Q15293 331 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 SMN1Q16637 294 aaKnown RBP11.31□□□□□ -0.6
TPM1-223ENST00000560445 TMEM30BQ3MIR4 351 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 TPTE2P1Q5T6R2 138 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 DDI2Q5TDH0 399 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 CCBE1Q6UXH8 406 aaPredicted RBP11.31□□□□□ -0.6
TPM1-223ENST00000560445 ASCL4Q6XD76 172 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 OSR2Q8N2R0 312 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 C11orf44Q8N8P7 122 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 Q8NFD4 153 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 OR4X2Q8NGF9 303 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 TOMM40LQ969M1 308 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 TMEM80Q96HE8 168 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 ZNF649Q9BS31 505 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 SLC25A33Q9BSK2 321 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 TAS2R4Q9NYW5 299 aa11.31□□□□□ -0.6
TPM1-223ENST00000560445 TMEM30CPA0ZSE6 113 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 HSPB6O14558 160 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 OR7C1O76099 320 aaPredicted RBP11.3□□□□□ -0.6
TPM1-223ENST00000560445 HTR3BO95264 441 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 GTF2F2P13984 249 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 GZMHP20718 246 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 IL3RAP26951 378 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 MAPK3P27361 379 aaPredicted RBP11.3□□□□□ -0.6
TPM1-223ENST00000560445 OR3A4PP47883 348 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 Q499Y3 187 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 CENPVQ7Z7K6 275 aaPredicted RBP11.3□□□□□ -0.6
TPM1-223ENST00000560445 THNSL2Q86YJ6 484 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 CDH26Q8IXH8 852 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 C8orf59Q8N0T1 100 aaPredicted RBP11.3□□□□□ -0.6
TPM1-223ENST00000560445 OR8H3Q8N146 312 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 R3HDM4Q96D70 268 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 MRPS24Q96EL2 167 aaKnown RBP11.3□□□□□ -0.6
TPM1-223ENST00000560445 KIRREL1Q96J84 757 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 RBM14Q96PK6 669 aaKnown RBP11.3□□□□□ -0.6
TPM1-223ENST00000560445 DPCDQ9BVM2 203 aaPredicted RBP11.3□□□□□ -0.6
TPM1-223ENST00000560445 LINC00574Q9H8X3 128 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 ZNF286AQ9HBT8 521 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 ING3Q9NXR8 418 aa11.3□□□□□ -0.6
TPM1-223ENST00000560445 IDI2-AS1Q9NZ38 188 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms