RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 SCGB1C2P0DMR2 95 aa5.85□□□□□ -1.47
CASC4-208ENST00000559151 RPS11P62280 158 aaKnown RBP eCLIP5.85□□□□□ -1.47
CASC4-208ENST00000559151 C10orf107Q8IVU9 208 aa5.85□□□□□ -1.47
CASC4-208ENST00000559151 C1orf64Q8NEQ6 169 aa5.85□□□□□ -1.47
CASC4-208ENST00000559151 OR8A1Q8NGG7 326 aa5.85□□□□□ -1.47
CASC4-208ENST00000559151 ACTL9Q8TC94 416 aa5.85□□□□□ -1.47
CASC4-208ENST00000559151 SCGB1C1Q8TD33 95 aa5.85□□□□□ -1.47
CASC4-208ENST00000559151 C2orf15Q8WU43 125 aaKnown RBP5.85□□□□□ -1.47
CASC4-208ENST00000559151 NRBP2Q9NSY0 501 aa5.85□□□□□ -1.47
CASC4-208ENST00000559151 MS4A12Q9NXJ0 267 aa5.85□□□□□ -1.47
CASC4-208ENST00000559151 THADAQ6YHU6 1953 aa5.84□□□□□ -1.47
CASC4-208ENST00000559151 ABCB11O95342 1321 aa5.84□□□□□ -1.47
CASC4-208ENST00000559151 TRAV8-3A0A0A6YYJ7 113 aa5.84□□□□□ -1.47
CASC4-208ENST00000559151 A0A1B0GX12 115 aa5.84□□□□□ -1.47
CASC4-208ENST00000559151 GMNCA6NCL1 334 aa5.84□□□□□ -1.47
CASC4-208ENST00000559151 SLC2A1P11166 492 aa5.84□□□□□ -1.47
CASC4-208ENST00000559151 RAB25P57735 213 aa5.84□□□□□ -1.47
CASC4-208ENST00000559151 LCE3AQ5TA76 89 aa5.84□□□□□ -1.47
CASC4-208ENST00000559151 OR4C13Q8NGP0 309 aa5.84□□□□□ -1.47
CASC4-208ENST00000559151 YIPF5Q969M3 257 aa5.84□□□□□ -1.47
CASC4-208ENST00000559151 PGLYRP3Q96LB9 341 aa5.84□□□□□ -1.47
CASC4-208ENST00000559151 ANGPTL4Q9BY76 406 aa5.84□□□□□ -1.47
CASC4-208ENST00000559151 ULBP1Q9BZM6 244 aa5.84□□□□□ -1.47
CASC4-208ENST00000559151 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.84□□□□□ -1.47
CASC4-208ENST00000559151 PTPRKQ15262 1439 aa5.83□□□□□ -1.48
CASC4-208ENST00000559151 IGLL5B9A064 214 aa5.83□□□□□ -1.48
CASC4-208ENST00000559151 SULT1C2O00338 296 aa5.83□□□□□ -1.48
CASC4-208ENST00000559151 PLTPP55058 493 aa5.83□□□□□ -1.48
CASC4-208ENST00000559151 RAB31Q13636 194 aa5.83□□□□□ -1.48
CASC4-208ENST00000559151 GATD1Q8NB37 220 aa5.83□□□□□ -1.48
CASC4-208ENST00000559151 OR2M3Q8NG83 312 aa5.83□□□□□ -1.48
CASC4-208ENST00000559151 RORBQ92753 470 aa5.83□□□□□ -1.48
CASC4-208ENST00000559151 TAPBPLQ9BX59 468 aa5.83□□□□□ -1.48
CASC4-208ENST00000559151 C14orf166Q9Y224 244 aaKnown RBP5.83□□□□□ -1.48
CASC4-208ENST00000559151 FADS3Q9Y5Q0 445 aa5.83□□□□□ -1.48
CASC4-208ENST00000559151 ARHGEF12Q9NZN5 1544 aa5.83□□□□□ -1.48
CASC4-208ENST00000559151 C3P01024 1663 aa5.82□□□□□ -1.48
CASC4-208ENST00000559151 A0A1W2PRG6 482 aa5.82□□□□□ -1.48
CASC4-208ENST00000559151 GOLGA6L4A6NEF3 574 aa5.82□□□□□ -1.48
CASC4-208ENST00000559151 PDCD6O75340 191 aa5.82□□□□□ -1.48
CASC4-208ENST00000559151 CD151P48509 253 aa5.82□□□□□ -1.48
CASC4-208ENST00000559151 NXNL2Q5VZ03 156 aa5.82□□□□□ -1.48
CASC4-208ENST00000559151 LAMTOR1Q6IAA8 161 aa5.82□□□□□ -1.48
CASC4-208ENST00000559151 DPPA2Q7Z7J5 298 aa5.82□□□□□ -1.48
CASC4-208ENST00000559151 FAM45AQ8TCE6 357 aa5.82□□□□□ -1.48
CASC4-208ENST00000559151 PHF10Q8WUB8 498 aaKnown RBP5.82□□□□□ -1.48
CASC4-208ENST00000559151 SPACA1Q9HBV2 294 aa5.82□□□□□ -1.48
CASC4-208ENST00000559151 CRXO43186 299 aaPredicted RBP5.81□□□□□ -1.48
CASC4-208ENST00000559151 SNAP29O95721 258 aa5.81□□□□□ -1.48
CASC4-208ENST00000559151 CA2P00918 260 aa5.81□□□□□ -1.48
CASC4-208ENST00000559151 IGHG2P01859 326 aa5.81□□□□□ -1.48
CASC4-208ENST00000559151 RNASE2P10153 161 aaKnown RBP5.81□□□□□ -1.48
CASC4-208ENST00000559151 IGFBP7Q16270 282 aa5.81□□□□□ -1.48
CASC4-208ENST00000559151 USP50Q70EL3 339 aaPredicted RBP5.81□□□□□ -1.48
CASC4-208ENST00000559151 MARCH3Q86UD3 253 aa5.81□□□□□ -1.48
CASC4-208ENST00000559151 SHANK2-AS3Q9BTD1 123 aa5.81□□□□□ -1.48
CASC4-208ENST00000559151 MED10Q9BTT4 135 aa5.81□□□□□ -1.48
CASC4-208ENST00000559151 BBS2Q9BXC9 721 aa5.81□□□□□ -1.48
CASC4-208ENST00000559151 DSN1Q9H410 356 aa5.81□□□□□ -1.48
CASC4-208ENST00000559151 RICTORQ6R327 1708 aa5.81□□□□□ -1.48
CASC4-208ENST00000559151 NOS1P29475 1434 aa5.81□□□□□ -1.48
CASC4-208ENST00000559151 I3L4J1 428 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 NDUFS6O75380 124 aaKnown RBP5.8□□□□□ -1.48
CASC4-208ENST00000559151 PSMB9P28065 219 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 FLI1Q01543 452 aaPredicted RBP5.8□□□□□ -1.48
CASC4-208ENST00000559151 SYCP1Q15431 976 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 LDLRAD2Q5SZI1 272 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 TMEM215Q68D42 235 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 DGAT2L6Q6ZPD8 337 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 FAM183BPQ6ZVS7 135 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 AMN1Q8IY45 258 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 ACBD4Q8NC06 268 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 ANGPTL6Q8NI99 470 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 ZNF721Q8TF20 911 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 CCDC127Q96BQ5 260 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 MRAP2Q96G30 205 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 PLA2G12AQ9BZM1 189 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 FBXL15Q9H469 300 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 TRIM45Q9H8W5 580 aaPredicted RBP5.8□□□□□ -1.48
CASC4-208ENST00000559151 ZNF492Q9P255 531 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 URGCP-MRPS24S4R325 110 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 TRAPPC8Q9Y2L5 1435 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 PLXNB3Q9ULL4 1909 aa5.8□□□□□ -1.48
CASC4-208ENST00000559151 VGLL3A8MV65 326 aa5.79□□□□□ -1.48
CASC4-208ENST00000559151 ELK4P28324 431 aa5.79□□□□□ -1.48
CASC4-208ENST00000559151 ENDOGQ14249 297 aaKnown RBP5.79□□□□□ -1.48
CASC4-208ENST00000559151 OLFM3Q96PB7 478 aa5.79□□□□□ -1.48
CASC4-208ENST00000559151 GMEB1Q9Y692 573 aa5.79□□□□□ -1.48
CASC4-208ENST00000559151 SUPT6HQ7KZ85 1726 aaKnown RBP5.79□□□□□ -1.48
CASC4-208ENST00000559151 TMEM94Q12767 1356 aa5.79□□□□□ -1.48
CASC4-208ENST00000559151 CPS1P31327 1500 aa5.79□□□□□ -1.48
CASC4-208ENST00000559151 NEO1Q92859 1461 aa5.78□□□□□ -1.48
CASC4-208ENST00000559151 TRGV3P03979 118 aa5.78□□□□□ -1.48
CASC4-208ENST00000559151 PMS2P3Q13401 168 aa5.78□□□□□ -1.48
CASC4-208ENST00000559151 ZFP82Q8N141 532 aa5.78□□□□□ -1.48
CASC4-208ENST00000559151 ZNF738Q8NE65 137 aa5.78□□□□□ -1.48
CASC4-208ENST00000559151 PDCD6IPQ8WUM4 868 aaKnown RBP5.78□□□□□ -1.48
CASC4-208ENST00000559151 FAAP24Q9BTP7 215 aa5.78□□□□□ -1.48
CASC4-208ENST00000559151 SHANK2Q9UPX8 1470 aa5.77□□□□□ -1.49
CASC4-208ENST00000559151 USP42Q9H9J4 1324 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms