RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 CHST6Q9GZX3 395 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 WNK1Q9H4A3 2382 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 IFT22Q9H7X7 185 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 LINC00574Q9H8X3 128 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 PAK1IP1Q9NWT1 392 aaPredicted RBP8.16□□□□□ -1.1
USP3-207ENST00000558218 IL36GQ9NZH8 169 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 DPM3Q9P2X0 92 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 PKD1L1Q8TDX9 2849 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 KBTBD11-OT1A0A1B0GTJ5 212 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 EFCAB10A6NFE3 127 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 LEUTXA8MZ59 168 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 OOSP1A8MZH6 123 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 IGLV1-47P01700 117 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 CD1AP06126 327 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 CGB3P0DN86 165 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 CGB7P0DN87 165 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 C21orf33P30042 268 aaPredicted RBP8.15□□□□□ -1.1
USP3-207ENST00000558218 BRS3P32247 399 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 CEACAM3P40198 252 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 PTGFRP43088 359 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 GLIPR1P48060 266 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 TAS2R43P59537 309 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 PPP3R1P63098 170 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 SCN1BQ07699 218 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 AESQ08117 197 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 GPR176Q14439 515 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 FAM189A2Q15884 450 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 C2orf68Q2NKX9 166 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 YIF1BQ5BJH7 314 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 NHLRC3Q5JS37 347 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 C16orf82Q7Z2V1 217 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 LINC00596Q86U02 117 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 CDH26Q8IXH8 852 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 DYNAPQ8N1N2 210 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 TPRX1Q8N7U7 411 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 OR10A7Q8NGE5 316 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 OR4D6Q8NGJ1 314 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 CNIH3Q8TBE1 160 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 CFHR4Q92496 578 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 THRSPQ92748 146 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 TMEM106AQ96A25 262 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 WDR89Q96FK6 387 aaPredicted RBP8.15□□□□□ -1.1
USP3-207ENST00000558218 SPACA5Q96QH8 159 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 GPER1Q99527 375 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 PRSS22Q9GZN4 317 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 PLCXD1Q9NUJ7 323 aa8.15□□□□□ -1.1
USP3-207ENST00000558218 CNOT2Q9NZN8 540 aaKnown RBP8.15□□□□□ -1.1
USP3-207ENST00000558218 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.15□□□□□ -1.1
USP3-207ENST00000558218 TRBV5-5A0A0J9YX44 114 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 KRTAP9-6A0A140TA67 174 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 GABRPO00591 440 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 CASQ2O14958 399 aaPredicted RBP8.14□□□□□ -1.11
USP3-207ENST00000558218 CALCBP10092 127 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 GZMHP20718 246 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 CDK2P24941 298 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 ZNF93P35789 620 aaPredicted RBP8.14□□□□□ -1.11
USP3-207ENST00000558218 SNU13P55769 128 aaKnown RBP8.14□□□□□ -1.11
USP3-207ENST00000558218 EMX1Q04741 257 aaPredicted RBP8.14□□□□□ -1.11
USP3-207ENST00000558218 SLC34A1Q06495 639 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 ST3GAL4Q11206 333 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 RSU1Q15404 277 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 Q499Y3 187 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 LDLRAD2Q5SZI1 272 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 OR2G6Q5TZ20 316 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 DMKNQ6E0U4 476 aaPredicted RBP8.14□□□□□ -1.11
USP3-207ENST00000558218 RNF144BQ7Z419 303 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 SATL1Q86VE3 508 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 ZNF485Q8NCK3 441 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 OR4P4Q8NGL7 312 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 NDNFQ8TB73 568 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 TNFAIP8L1Q8WVP5 186 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 CYGBQ8WWM9 190 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 RGP1Q92546 391 aaPredicted RBP8.14□□□□□ -1.11
USP3-207ENST00000558218 GGHQ92820 318 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 GHSRQ92847 366 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 MRPS24Q96EL2 167 aaKnown RBP8.14□□□□□ -1.11
USP3-207ENST00000558218 COQ2Q96H96 371 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 AKR1E2Q96JD6 320 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 S100A13Q99584 98 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 METTL9Q9H1A3 318 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 CKLFQ9UBR5 152 aa8.14□□□□□ -1.11
USP3-207ENST00000558218 TRAV24A0A0B4J272 114 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 NPIPB11E5RHQ5 1161 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 H0YJX3 145 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 BUB1B-PAK6H3BSN5 160 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 F2RL2O00254 374 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 TOR1AO14656 332 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 CHST1O43916 411 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 FBXO24O75426 580 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 MMP23AO75900 390 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 CLIC3O95833 236 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 CSTBP04080 98 aaKnown RBP8.13□□□□□ -1.11
USP3-207ENST00000558218 CSF1P09603 554 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 IGFBP3P17936 291 aaPredicted RBP8.13□□□□□ -1.11
USP3-207ENST00000558218 BDKRB2P30411 391 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 CAPGP40121 348 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 SOX2P48431 317 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 RAB13P51153 203 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 RIPK1Q13546 671 aa8.13□□□□□ -1.11
USP3-207ENST00000558218 RCN1Q15293 331 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms