RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SLC35F2Q8IXU6 374 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 YIPF7Q8N8F6 280 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 OR6Q1Q8NGQ2 317 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 DCUN1D4Q92564 292 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 RFT1Q96AA3 541 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 COQ2Q96H96 371 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 EAF1Q96JC9 268 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-219ENST00000556432 PPIL3Q9H2H8 161 aaKnown RBP10.84□□□□□ -0.67
ACTN1-219ENST00000556432 MAGIXQ9H6Y5 334 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 GNB4Q9HAV0 340 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 NEK6Q9HC98 313 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 CALYQ9NYX4 217 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 TVP23BQ9NYZ1 205 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 PSG11Q9UQ72 335 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 A0A1W2PPE3 182 aa10.83□□□□□ -0.68
ACTN1-219ENST00000556432 ZNF670-ZNF695F2Z2N8 137 aa10.83□□□□□ -0.68
ACTN1-219ENST00000556432 CDK5Q00535 292 aa10.83□□□□□ -0.68
ACTN1-219ENST00000556432 Q6ZSR3 168 aa10.83□□□□□ -0.68
ACTN1-219ENST00000556432 ZNF565Q8N9K5 539 aa10.83□□□□□ -0.68
ACTN1-219ENST00000556432 Q8N9W7 124 aa10.83□□□□□ -0.68
ACTN1-219ENST00000556432 OR2T10Q8NGZ9 312 aa10.83□□□□□ -0.68
ACTN1-219ENST00000556432 KCTD7Q96MP8 289 aa10.83□□□□□ -0.68
ACTN1-219ENST00000556432 GHITMQ9H3K2 345 aa10.83□□□□□ -0.68
ACTN1-219ENST00000556432 IDI2-AS1Q9NZ38 188 aa10.83□□□□□ -0.68
ACTN1-219ENST00000556432 ACTR3BQ9P1U1 418 aa10.83□□□□□ -0.68
ACTN1-219ENST00000556432 MRM2Q9UI43 246 aaKnown RBP10.83□□□□□ -0.68
ACTN1-219ENST00000556432 MEIKINA0A087WXM9 373 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 IGHV1-3A0A0C4DH29 117 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 DEGS1O15121 323 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 SNX3O60493 162 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 GAPDHP04406 335 aaKnown RBP10.82□□□□□ -0.68
ACTN1-219ENST00000556432 CSN2P05814 226 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 OR5H8P0DN80 308 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 IGHV4-30-4P0DP06 118 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 OSMP13725 252 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 PSMB8P28062 276 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 SOX6P35712 828 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 ISL1P61371 349 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 GNB1P62873 340 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 CFHR3Q02985 330 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 PDZK1IP1Q13113 114 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 ASPHD1Q5U4P2 390 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 LHFPL2Q6ZUX7 228 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 CATSPERDQ86XM0 798 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 DEFB107AQ8IZN7 70 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 CHST4Q8NCG5 386 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 DNAAF1Q8NEP3 725 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 RFESDQ8TAC1 157 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 ST6GALNAC6Q969X2 333 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 HSPB9Q9BQS6 159 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 SPATA25Q9BR10 227 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 FAM53CQ9NYF3 392 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 KIF25Q9UIL4 384 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 VSIG4Q9Y279 399 aa10.82□□□□□ -0.68
ACTN1-219ENST00000556432 HYDINQ4G0P3 5121 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 LOC107986453A0A1B0GWG9 222 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 SLC33A1O00400 549 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-219ENST00000556432 GNGT2O14610 69 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 CST1P01037 141 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 IL1AP01583 271 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 IFNA6P05013 189 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 KRT8P05787 483 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 PRKACBP22694 351 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 C21orf33P30042 268 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-219ENST00000556432 ZP1P60852 638 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 EBI3Q14213 229 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 FAM53AQ6NSI3 398 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-219ENST00000556432 IZUMO1Q8IYV9 350 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 OR5D18Q8NGL1 313 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 OR13A1Q8NGR1 328 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 PP6455Q8WZ26 134 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 UBE2E2Q96LR5 201 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 S1PR3Q99500 378 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 TBX5Q99593 518 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 OSBPL10Q9BXB5 764 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 COMMD4Q9H0A8 199 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 KLK15Q9H2R5 256 aa10.81□□□□□ -0.68
ACTN1-219ENST00000556432 CHCHD3Q9NX63 227 aaKnown RBP10.81□□□□□ -0.68
ACTN1-219ENST00000556432 TCRBV5S2A0A599 114 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 RBMY1BA6NDE4 496 aaKnown RBP10.8□□□□□ -0.68
ACTN1-219ENST00000556432 RBMY1EA6NEQ0 496 aaKnown RBP10.8□□□□□ -0.68
ACTN1-219ENST00000556432 I3L521 148 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 MOSP00540 346 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 RBMY1DP0C7P1 496 aaKnown RBP10.8□□□□□ -0.68
ACTN1-219ENST00000556432 ZNF20P17024 532 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 MYF6P23409 242 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 MNAT1P51948 309 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 ZNF816Q0VGE8 651 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-219ENST00000556432 GK3PQ14409 553 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 SPATS1Q496A3 300 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 PAN3Q58A45 887 aaKnown RBP10.8□□□□□ -0.68
ACTN1-219ENST00000556432 BCDIN3DQ7Z5W3 292 aaKnown RBP10.8□□□□□ -0.68
ACTN1-219ENST00000556432 SGPP2Q8IWX5 399 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 Q8N6K4 173 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 CCDC54Q8NEL0 328 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 MRGPRDQ8TDS7 321 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 ARPC1AQ92747 370 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 DLX4Q92988 240 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-219ENST00000556432 MNTQ99583 582 aa10.8□□□□□ -0.68
ACTN1-219ENST00000556432 CLN6Q9NWW5 311 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms