RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 LINC00312Q9Y6C7 94 aa11.24□□□□□ -0.61
TROAP-213ENST00000550709 MEIKINA0A087WXM9 373 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 A0A0A6YYJ9 748 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 TRAV39A0A0B4J263 110 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 MEIOCA2RUB1 952 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 NPFFO15130 113 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 SLC22A1O15245 554 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 MYL9P24844 172 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 UBE2E1P51965 193 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 RAB11BQ15907 218 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 KRTAP24-1Q3LI83 254 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 HCP5Q6MZN7 132 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 CD200R1LQ6Q8B3 271 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 PLPPR1Q8TBJ4 325 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 TMEM158Q8WZ71 300 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 JMJD8Q96S16 334 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 CST11Q9H112 138 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 UNKLQ9H9P5 680 aaKnown RBP11.23□□□□□ -0.61
TROAP-213ENST00000550709 GHRLQ9UBU3 117 aa11.23□□□□□ -0.61
TROAP-213ENST00000550709 A0A087WXM4 84 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 SHISA3A0PJX4 238 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 SMIM30A4D0T7 59 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 C17orf98A8MV24 154 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 SLC17A2O00624 439 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 MMP23AO75900 390 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 CSN2P05814 226 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 UBBP0CG47 229 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 VSIG8P0DPA2 414 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 GLP1RP43220 463 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 CLDN12P56749 244 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 OR10A3P58181 314 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 MPV17LQ2QL34 196 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 SYT6Q5T7P8 510 aaPredicted RBP11.22□□□□□ -0.61
TROAP-213ENST00000550709 PRAMEF5Q5TYX0 476 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 LINC00596Q86U02 117 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 ZDHHC22Q8N966 263 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 OR6M1Q8NGM8 313 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 SLC25A28Q96A46 364 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 MRPS24Q96EL2 167 aaKnown RBP11.22□□□□□ -0.61
TROAP-213ENST00000550709 Q96M66 194 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 BARHL1Q9BZE3 327 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 OR51E2Q9H255 320 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 IFT22Q9H7X7 185 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 STUB1Q9UNE7 303 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 SSR3Q9UNL2 185 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 UBE2J1Q9Y385 318 aaPredicted RBP11.22□□□□□ -0.61
TROAP-213ENST00000550709 V9GY05 133 aa11.22□□□□□ -0.61
TROAP-213ENST00000550709 TRAV1-2A0A0B4J238 106 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 LOC100506127A0A0U1RQW1 187 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 DNAJC9-AS1A6NH13 148 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 PDCD5O14737 125 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 HOXA3O43365 443 aaPredicted RBP11.21□□□□□ -0.61
TROAP-213ENST00000550709 PAHP00439 452 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 IGHV1-8P0DP01 117 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 CD37P11049 281 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 CD36P16671 472 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 OMGP23515 440 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 SAA4P35542 130 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 DYNC1I2Q13409 638 aaKnown RBP11.21□□□□□ -0.61
TROAP-213ENST00000550709 TUSC1Q2TAM9 212 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 HES5Q5TA89 166 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 RSBN1Q5VWQ0 802 aaPredicted RBP11.21□□□□□ -0.61
TROAP-213ENST00000550709 RAB12Q6IQ22 244 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 KCNG3Q8TAE7 436 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 CCDC107Q8WV48 283 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 C17orf50Q8WW18 174 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 CYYR1Q96J86 154 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 CHCHD6Q9BRQ6 235 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 TMEM59Q9BXS4 323 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 GAL3ST2Q9H3Q3 398 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 ZNF696Q9H7X3 374 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 VCX3AQ9NNX9 186 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 TXNL4BQ9NX01 149 aaKnown RBP11.21□□□□□ -0.61
TROAP-213ENST00000550709 OR6C3Q9NZP0 311 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 PEX16Q9Y5Y5 336 aa11.21□□□□□ -0.61
TROAP-213ENST00000550709 UBE2QL1A1L167 161 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 FAM172BPA6NC97 362 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 MCRIP1C9JLW8 97 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 TRIM77I1YAP6 450 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 CLPXO76031 633 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 BPNT1O95861 308 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 RBP4P02753 201 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 ARSBP15848 533 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 FUT3P21217 361 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 GADD45AP24522 165 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 CDK2P24941 298 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 PAX6P26367 422 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 KCNJ3P48549 501 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 PSMD7P51665 324 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 LGALS4P56470 323 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 RPS27AP62979 156 aaKnown RBP11.2□□□□□ -0.62
TROAP-213ENST00000550709 UBA52P62987 128 aaKnown RBP11.2□□□□□ -0.62
TROAP-213ENST00000550709 UNC119Q13432 240 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 SLC9A3R2Q15599 337 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 NKAPLQ5M9Q1 402 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 SIGIRRQ6IA17 410 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 BAIAP2L2Q6UXY1 529 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.2□□□□□ -0.62
TROAP-213ENST00000550709 ZNF565Q8N9K5 539 aa11.2□□□□□ -0.62
TROAP-213ENST00000550709 OR51D1Q8NGF3 324 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms