RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 OR13D1Q8NGV5 346 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 OIT3Q8WWZ8 545 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 SPSB4Q96A44 273 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 PTX4Q96A99 478 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 TM4SF18Q96CE8 201 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 ZG16BQ96DA0 208 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 RAB3CQ96E17 227 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 NUDT16L1Q9BRJ7 211 aaKnown RBP5.56□□□□□ -1.52
CCDC60-205ENST00000546345 PAPOLGQ9BWT3 736 aaKnown RBP5.56□□□□□ -1.52
CCDC60-205ENST00000546345 TBL1XR1Q9BZK7 514 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 FXYD6Q9H0Q3 95 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 ZNF665Q9H7R5 613 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 NIT2Q9NQR4 276 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 UQCC1Q9NVA1 299 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 C11orf21Q9P2W6 132 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 DNAJB11Q9UBS4 358 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 SHPKQ9UHJ6 478 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 AMDHD2Q9Y303 409 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 V9GY05 133 aa5.56□□□□□ -1.52
CCDC60-205ENST00000546345 TEX13DA0A0J9YY54 714 aaPredicted RBP5.55□□□□□ -1.52
CCDC60-205ENST00000546345 MDFIC2A0A1B0GVS7 189 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 TVP23AA6NH52 213 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 OR5H14A6NHG9 310 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 LINC00587B1AMM8 73 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 J3QLI3 93 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 LGALS8O00214 317 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 AK1P00568 194 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 IGHV2-5P01817 119 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 CRYBA1P05813 215 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 SPARCP09486 303 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 CECR9P0C854 216 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 SELEP16581 610 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 ATF1P18846 271 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 TNFRSF1BP20333 461 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 COL8A2P25067 703 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 THBS4P35443 961 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 P2RX1P51575 399 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 ARHGDIBP52566 201 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 PRKAG1P54619 331 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 RPS16P62249 146 aaKnown RBP5.55□□□□□ -1.52
CCDC60-205ENST00000546345 ZNF117Q03924 483 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 CBFBQ13951 182 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 TOMM34Q15785 309 aaPredicted RBP5.55□□□□□ -1.52
CCDC60-205ENST00000546345 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 TMEM176BQ3YBM2 270 aaPredicted RBP5.55□□□□□ -1.52
CCDC60-205ENST00000546345 HIKESHIQ53FT3 197 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 HIST2H3PS2Q5TEC6 136 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 OR7E24Q6IFN5 339 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 ANKRD16Q6P6B7 361 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 Q6ZTK2 550 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 BAP18Q8IXM2 172 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 ZNF100Q8IYN0 542 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 DEFB108BQ8NET1 73 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 SDR9C7Q8NEX9 313 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 NUP37Q8NFH4 326 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 OR5J2Q8NH18 312 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 OR4C3Q8NH37 302 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 OR52I2Q8NH67 350 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 CDC26Q8NHZ8 85 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 GTF3AQ92664 365 aaKnown RBP5.55□□□□□ -1.52
CCDC60-205ENST00000546345 GHSRQ92847 366 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 APH1AQ96BI3 265 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 SCGB3A2Q96PL1 93 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 TEAD3Q99594 435 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 PRRT1Q99946 306 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 LMF2Q9BU23 707 aaKnown RBP5.55□□□□□ -1.52
CCDC60-205ENST00000546345 NMES1Q9C002 83 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 RERGLQ9H628 205 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 ZNF442Q9H7R0 627 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 MTHFD2LQ9H903 347 aaPredicted RBP5.55□□□□□ -1.52
CCDC60-205ENST00000546345 DUSP22Q9NRW4 184 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 MIOXQ9UGB7 285 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 FOXJ3Q9UPW0 622 aa5.55□□□□□ -1.52
CCDC60-205ENST00000546345 LYSTQ99698 3801 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 MEX3AA1L020 520 aaKnown RBP5.54□□□□□ -1.52
CCDC60-205ENST00000546345 CXorf65A6NEN9 183 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 COLCA2A8K830 154 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 AP4M1O00189 453 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 BHLHE40O14503 412 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 NXPH3O95157 252 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 IGLV1-44P01699 117 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 CD74P04233 296 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 NGFRP08138 427 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 LYL1P12980 280 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 ZNF35P13682 527 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 ACHEP22303 614 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 SLC2A5P22732 501 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 PTGFRP43088 359 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 RAD52P43351 418 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 PRKXP51817 358 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 F2RL1P55085 397 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 H2BFSP57053 126 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 TAS2R60P59551 318 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 SPCS3P61009 180 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 POU3F1Q03052 451 aaPredicted RBP5.54□□□□□ -1.52
CCDC60-205ENST00000546345 DCAF12L2Q5VW00 463 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 RUSC1-AS1Q66K80 236 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 RAB12Q6IQ22 244 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 ZCCHC12Q6PEW1 402 aa5.54□□□□□ -1.52
CCDC60-205ENST00000546345 ARL9Q6T311 187 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms