RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 ZNF728P0DKX0 622 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 RAB6AP20340 208 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 PRTN3P24158 256 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 SDC2P34741 201 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 EDDM3AQ14507 147 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 C2orf76Q3KRA6 126 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 SLC35E4Q6ICL7 350 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 GPR141Q7Z602 305 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 OR4M1Q8NGD0 313 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 FAM46BQ96A09 425 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 ZNF714Q96N38 554 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 NEDD4LQ96PU5 975 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 CENPOQ9BU64 300 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 FUNDC2Q9BWH2 189 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 HEXA-AS1Q9H8Q6 139 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 RAB9BQ9NP90 201 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 SCOCQ9UIL1 159 aa15.45■□□□□ 0.06
VPS33A-205ENST00000541169 SONP18583 2426 aaKnown RBP15.44■□□□□ 0.06
VPS33A-205ENST00000541169 A0A1W2PP11 408 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 SHISA3A0PJX4 238 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 ODAMA1E959 279 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 PDCD6O75340 191 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 IL1AP01583 271 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 RPL5P46777 297 aaKnown RBP15.44■□□□□ 0.06
VPS33A-205ENST00000541169 ALDH3B2P48448 385 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 ERVFRD-1P60508 538 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 P2RY14Q15391 338 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 RAB12Q6IQ22 244 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 C9orf139Q6ZV77 190 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 ANKRD13BQ86YJ7 626 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 OR51D1Q8NGF3 324 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 LIN7BQ9HAP6 207 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 NAV3Q8IVL0 2385 aa15.44■□□□□ 0.06
VPS33A-205ENST00000541169 TMEM30CPA0ZSE6 113 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 METTL21EPA6NDL7 271 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 POM121CA8CG34 1229 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 C17orf98A8MV24 154 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 SCGNO76038 276 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 TFAP2AP05549 437 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 GZMHP20718 246 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 OR10A3P58181 314 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 AESQ08117 197 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 UNC119Q13432 240 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 HES5Q5TA89 166 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 OR52W1Q6IF63 320 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 SFXN4Q6P4A7 337 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 VMO1Q7Z5L0 202 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 TRAPPC6BQ86SZ2 158 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 FAM89BQ8N5H3 189 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 OR56B1Q8NGI3 324 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 NEK7Q8TDX7 302 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 TBX15Q96SF7 602 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 HSF4Q9ULV5 492 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 PEX16Q9Y5Y5 336 aa15.43■□□□□ 0.06
VPS33A-205ENST00000541169 FN1P02751 2386 aaKnown RBP15.42■□□□□ 0.06
VPS33A-205ENST00000541169 DSCAML1Q8TD84 2053 aa15.42■□□□□ 0.06
VPS33A-205ENST00000541169 A0A0A6YYJ9 748 aa15.42■□□□□ 0.06
VPS33A-205ENST00000541169 ZNF729A6NN14 1252 aaPredicted RBP15.42■□□□□ 0.06
VPS33A-205ENST00000541169 LDLRAD4O15165 306 aa15.42■□□□□ 0.06
VPS33A-205ENST00000541169 EPHA1P21709 976 aa15.42■□□□□ 0.06
VPS33A-205ENST00000541169 ATXN7L3Q14CW9 347 aaPredicted RBP15.42■□□□□ 0.06
VPS33A-205ENST00000541169 ARL6IP1Q15041 203 aa15.42■□□□□ 0.06
VPS33A-205ENST00000541169 RSBN1Q5VWQ0 802 aaPredicted RBP15.42■□□□□ 0.06
VPS33A-205ENST00000541169 TRAT1Q6PIZ9 186 aa15.42■□□□□ 0.06
VPS33A-205ENST00000541169 Q8N7P7 452 aa15.42■□□□□ 0.06
VPS33A-205ENST00000541169 COQ2Q96H96 371 aa15.42■□□□□ 0.06
VPS33A-205ENST00000541169 BCL7BQ9BQE9 202 aa15.42■□□□□ 0.06
VPS33A-205ENST00000541169 MS4A7Q9GZW8 240 aaPredicted RBP15.42■□□□□ 0.06
VPS33A-205ENST00000541169 MEIKINA0A087WXM9 373 aa15.41■□□□□ 0.06
VPS33A-205ENST00000541169 HSPB6O14558 160 aa15.41■□□□□ 0.06
VPS33A-205ENST00000541169 GLIPR1P48060 266 aa15.41■□□□□ 0.06
VPS33A-205ENST00000541169 UBE2E1P51965 193 aa15.41■□□□□ 0.06
VPS33A-205ENST00000541169 ZNF273Q14593 569 aa15.41■□□□□ 0.06
VPS33A-205ENST00000541169 IL17RELQ6ZVW7 336 aa15.41■□□□□ 0.06
VPS33A-205ENST00000541169 ZNF554Q86TJ5 538 aa15.41■□□□□ 0.06
VPS33A-205ENST00000541169 BPIFB2Q8N4F0 458 aa15.41■□□□□ 0.06
VPS33A-205ENST00000541169 OR10A7Q8NGE5 316 aa15.41■□□□□ 0.06
VPS33A-205ENST00000541169 LPAR5Q9H1C0 372 aa15.41■□□□□ 0.06
VPS33A-205ENST00000541169 RIMS4Q9H426 269 aaPredicted RBP15.41■□□□□ 0.06
VPS33A-205ENST00000541169 DAPK2Q9UIK4 370 aa15.41■□□□□ 0.06
VPS33A-205ENST00000541169 ETV7Q9Y603 341 aa15.41■□□□□ 0.06
VPS33A-205ENST00000541169 TRAV40A0A0B4J280 105 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 IGHV1-69DA0A0B4J2H0 117 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 GABARAPO95166 117 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 IGHV1-69P01742 117 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 CHATP28329 748 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 BLVRBP30043 206 aaPredicted RBP15.4■□□□□ 0.06
VPS33A-205ENST00000541169 DLX6P56179 175 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 CLDN12P56749 244 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 TMEM30BQ3MIR4 351 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 KLF17Q5JT82 389 aaPredicted RBP15.4■□□□□ 0.06
VPS33A-205ENST00000541169 HEPN1Q6WQI6 88 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 ZNF497Q6ZNH5 498 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 USP43Q70EL4 1123 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 NR2C2APQ86WQ0 139 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 GAPTQ8N292 157 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 OR13D1Q8NGV5 346 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 ZNF418Q8TF45 676 aaPredicted RBP15.4■□□□□ 0.06
VPS33A-205ENST00000541169 JMJD8Q96S16 334 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 SUCNR1Q9BXA5 334 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms