RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 IGHV2-70DA0A0C4DH43 119 aa13.75□□□□□ -0.21
UBC-208ENST00000540700 CHATP28329 748 aa13.75□□□□□ -0.21
UBC-208ENST00000540700 EDDM3AQ14507 147 aa13.75□□□□□ -0.21
UBC-208ENST00000540700 ATXN7L3Q14CW9 347 aaPredicted RBP13.75□□□□□ -0.21
UBC-208ENST00000540700 PAN3Q58A45 887 aaKnown RBP13.75□□□□□ -0.21
UBC-208ENST00000540700 CHST4Q8NCG5 386 aa13.75□□□□□ -0.21
UBC-208ENST00000540700 LY6G5BQ8NDX9 201 aa13.75□□□□□ -0.21
UBC-208ENST00000540700 TMEM186Q96B77 213 aa13.75□□□□□ -0.21
UBC-208ENST00000540700 DPCDQ9BVM2 203 aaPredicted RBP13.75□□□□□ -0.21
UBC-208ENST00000540700 HIF1ANQ9NWT6 349 aa13.75□□□□□ -0.21
UBC-208ENST00000540700 RAB22AQ9UL26 194 aa13.75□□□□□ -0.21
UBC-208ENST00000540700 FAM90A10PA6NDY2 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 FAM90A18PA6NE21 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 FAM90A16PA6NEW6 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 FAM90A20PA6NIJ5 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 FAM90A8PA6NJQ4 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 FAM90A7PA6NKC0 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 FAM90A22PA8MWA6 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 FAM90A12PA8MX19 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 FAM90A5PA8MXJ8 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 FAM90A23PA8MXZ1 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 AVPP01185 164 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 FAM90A15PP0C7V4 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 FAM90A13PP0C7W8 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 FAM90A14PP0C7W9 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 FAM90A24PP0C7X0 464 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 RAB6AP20340 208 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 VEGFCP49767 419 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 DVL1P1P54792 670 aaPredicted RBP13.74□□□□□ -0.21
UBC-208ENST00000540700 AESQ08117 197 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 ZNF273Q14593 569 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 PLAC9Q5JTB6 97 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 ATAD3CQ5T2N8 411 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 C8orf46Q8TAG6 207 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 H1FXQ92522 213 aaKnown RBP13.74□□□□□ -0.21
UBC-208ENST00000540700 SULT4A1Q9BR01 284 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 MRI1Q9BV20 369 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 OCEL1Q9H607 264 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 ING3Q9NXR8 418 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 RSL24D1Q9UHA3 163 aaKnown RBP13.74□□□□□ -0.21
UBC-208ENST00000540700 INSIG2Q9Y5U4 225 aa13.74□□□□□ -0.21
UBC-208ENST00000540700 CCDC160A6NGH7 325 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 RAB27BO00194 218 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 MGST3O14880 152 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 PDCD6O75340 191 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 CSN2P05814 226 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 GLIPR1P48060 266 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 NKAPLQ5M9Q1 402 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 RSBN1Q5VWQ0 802 aaPredicted RBP13.73□□□□□ -0.21
UBC-208ENST00000540700 OLFML2AQ68BL7 652 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 RAB12Q6IQ22 244 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 Q6ZPA2 131 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 C1orf229Q6ZS94 237 aaPredicted RBP13.73□□□□□ -0.21
UBC-208ENST00000540700 C6orf201Q7Z4U5 140 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 RAB40AQ8WXH6 277 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 PTX4Q96A99 478 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 NUDT16L1Q9BRJ7 211 aaKnown RBP13.73□□□□□ -0.21
UBC-208ENST00000540700 TMPRSS13Q9BYE2 586 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 ABRACLQ9P1F3 81 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 OPN4Q9UHM6 478 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 SPATA2Q9UM82 520 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 KCNK7Q9Y2U2 307 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 PEX16Q9Y5Y5 336 aa13.73□□□□□ -0.21
UBC-208ENST00000540700 TRAV20A0A0B4J274 112 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 PPIAL4CA0A0B4J2A2 164 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 KIR2DS1A0A191URI9 304 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 SMIM31A0A1B0GVY4 71 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 CCL3L1P16619 93 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 FUT3P21217 361 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 BLVRBP30043 206 aaPredicted RBP13.72□□□□□ -0.21
UBC-208ENST00000540700 RORCP51449 518 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 DLX1P56177 255 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 P2RX3P56373 397 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 EDDM3BP56851 147 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 ERVFRD-1P60508 538 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 ACTG1P63261 375 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 TMEM200BQ69YZ2 307 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 GLCCI1Q86VQ1 547 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 CROCCP3Q8IVE0 287 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 ARHGAP5-AS1Q96IT6 56 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 URM1Q9BTM9 101 aaKnown RBP13.72□□□□□ -0.21
UBC-208ENST00000540700 FAAP24Q9BTP7 215 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 RHBDL2Q9NX52 303 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 ETV7Q9Y603 341 aa13.72□□□□□ -0.21
UBC-208ENST00000540700 TRAV39A0A0B4J263 110 aa13.71□□□□□ -0.21
UBC-208ENST00000540700 UBE2QL1A1L167 161 aa13.71□□□□□ -0.21
UBC-208ENST00000540700 A6NHS1 94 aa13.71□□□□□ -0.21
UBC-208ENST00000540700 GPR37O15354 613 aa13.71□□□□□ -0.21
UBC-208ENST00000540700 NOL3O60936 208 aaKnown RBP13.71□□□□□ -0.21
UBC-208ENST00000540700 VENTXO95231 258 aa13.71□□□□□ -0.21
UBC-208ENST00000540700 ECDO95905 644 aaPredicted RBP13.71□□□□□ -0.21
UBC-208ENST00000540700 PPIAL4GP0DN37 164 aa13.71□□□□□ -0.21
UBC-208ENST00000540700 ZNF182P17025 639 aaPredicted RBP13.71□□□□□ -0.21
UBC-208ENST00000540700 ERP29P30040 261 aaKnown RBP13.71□□□□□ -0.21
UBC-208ENST00000540700 DLX6P56179 175 aa13.71□□□□□ -0.21
UBC-208ENST00000540700 SCAND1P57086 179 aa13.71□□□□□ -0.21
UBC-208ENST00000540700 RPL31P62899 125 aaKnown RBP13.71□□□□□ -0.21
UBC-208ENST00000540700 PRB3Q04118 309 aaPredicted RBP13.71□□□□□ -0.21
UBC-208ENST00000540700 PAX8Q06710 450 aa13.71□□□□□ -0.21
UBC-208ENST00000540700 KRBOX4Q5JUW0 171 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms