RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 TTRP02766 147 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 OR8U8P0C7N1 319 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 NPBWR1P48145 328 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 PLAC9Q5JTB6 97 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 FAHD2BQ6P2I3 314 aaPredicted RBP8.73□□□□□ -1.01
TRAF1-202ENST00000540010 DRAM2Q6UX65 266 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 FAHD2AQ96GK7 314 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 FAM103A1Q9BTL3 118 aaKnown RBP8.73□□□□□ -1.01
TRAF1-202ENST00000540010 SEC11CQ9BY50 192 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 ALX4Q9H161 411 aaPredicted RBP8.73□□□□□ -1.01
TRAF1-202ENST00000540010 OR51I2Q9H344 312 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 C3orf85A0A1B0GTC6 90 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 PRR32B1ATL7 298 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 OR8G1Q15617 311 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 ZNF573Q86YE8 665 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 NMES1Q9C002 83 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 DOCK7Q96N67 2140 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 ZNHIT1O43257 154 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 MUC1P15941 1255 aaPredicted RBP8.72□□□□□ -1.01
TRAF1-202ENST00000540010 DSCR4P56555 118 aaPredicted RBP8.72□□□□□ -1.01
TRAF1-202ENST00000540010 TIPARPQ7Z3E1 657 aaKnown RBP8.72□□□□□ -1.01
TRAF1-202ENST00000540010 COMMD1Q8N668 190 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 C15orf54Q8N8G6 183 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 TMPRSS5Q9H3S3 457 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 TRAV39A0A0B4J263 110 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 MFSD2BA6NFX1 497 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 CLDN34H7C241 214 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 ENSAO43768 121 aaKnown RBP8.72□□□□□ -1.01
TRAF1-202ENST00000540010 TNFSF15O95150 251 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 MPGP29372 298 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 PTGDSP41222 190 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 ID4P47928 161 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 SULT1A1P50225 295 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 TBC1D28Q2M2D7 210 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 C2orf68Q2NKX9 166 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 PABPC1L2AQ5JQF8 200 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 ACER2Q5QJU3 275 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 NUP210LQ5VU65 1888 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 USP34Q70CQ2 3546 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 RNF133Q8WVZ7 376 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 MUCL1Q96DR8 90 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 UCN2Q96RP3 112 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 NRIP2Q9BQI9 281 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 RTL8AQ9BWD3 113 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 MFRPQ9BY79 579 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 A0A0C4DFX4 3053 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 IGLV1-36A0A0B4J1U3 117 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 SPINK4O60575 86 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 PDCD6O75340 191 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 COX5AP20674 150 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 G0S2P27469 103 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 GSK3AP49840 483 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 ZP4Q12836 540 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 MPV17LQ2QL34 196 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 HES3Q5TGS1 186 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 PPP1R32Q7Z5V6 425 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 BORCS7Q96B45 105 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 FAM210BQ96KR6 192 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 TPPP3Q9BW30 176 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 ACTR3CQ9C0K3 210 aaPredicted RBP8.72□□□□□ -1.01
TRAF1-202ENST00000540010 SPEGQ15772 3267 aa8.72□□□□□ -1.01
TRAF1-202ENST00000540010 A0A0G2JK05 382 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 OR2M5A3KFT3 312 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 AQP7P3A6NL99 342 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 AP4M1O00189 453 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 SH2D1BO14796 132 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 EFNA2O43921 213 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 IGHV3-13P01766 116 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 IGHV3-7P01780 117 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 CD59P13987 128 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 CTRB1P17538 263 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 CD200P41217 278 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 NOVA1P51513 510 aaKnown RBP8.71□□□□□ -1.01
TRAF1-202ENST00000540010 NHLH2Q02577 135 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 CTRB2Q6GPI1 263 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 OVCH2Q7RTZ1 564 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 SLC35G3Q8N808 338 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 TMEM18Q96B42 140 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 SLC2A9Q9NRM0 540 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 CACNG5Q9UF02 275 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 A0A087WV48 116 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 RBFOX3A6NFN3 312 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 G3V3Q6 166 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 KLRC4-KLRK1H3BQV0 150 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 CCL11P51671 97 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 SPINK9Q5DT21 86 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 ATRAIDQ6UW56 229 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 DBX2Q6ZNG2 339 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 MRPS24Q96EL2 167 aaKnown RBP8.71□□□□□ -1.01
TRAF1-202ENST00000540010 MTCH1Q9NZJ7 389 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 POLDIP2Q9Y2S7 368 aa8.71□□□□□ -1.01
TRAF1-202ENST00000540010 VPS13AQ96RL7 3174 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 CHST1O43916 411 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 OR7C2O60412 319 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 HPP00738 406 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 SLC25A6P12236 298 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 LIFP15018 202 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 MDKP21741 143 aaPredicted RBP8.71□□□□□ -1.02
TRAF1-202ENST00000540010 GCNT2Q8N0V5 402 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 ANGPTL4Q9BY76 406 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms