RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 MEF2CQ06413 473 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-206ENST00000539417 KRTAP21-3Q3LHN1 58 aa12.86□□□□□ -0.35
RPAIN-206ENST00000539417 KRBOX4Q5JUW0 171 aa12.86□□□□□ -0.35
RPAIN-206ENST00000539417 RSBN1Q5VWQ0 802 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-206ENST00000539417 FOXRED1Q96CU9 486 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-206ENST00000539417 Q96M66 194 aa12.86□□□□□ -0.35
RPAIN-206ENST00000539417 DPCDQ9BVM2 203 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-206ENST00000539417 IFT22Q9H7X7 185 aa12.86□□□□□ -0.35
RPAIN-206ENST00000539417 ODAMA1E959 279 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 TRIM64CA6NLI5 447 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 MPIG6BO95866 241 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 SMIM18P0DKX4 95 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 COX7A1P24310 79 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 HILS1P60008 231 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 ATAD3CQ5T2N8 411 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 HES5Q5TA89 166 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 OR6M1Q8NGM8 313 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 PPP1R35Q8TAP8 253 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 DYRK2Q92630 601 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 AJUBAQ96IF1 538 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 ZNF714Q96N38 554 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 NICN1Q9BSH3 213 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 KIF25Q9UIL4 384 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 STUB1Q9UNE7 303 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 LINC00312Q9Y6C7 94 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 KIAA2026Q5HYC2 2103 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 A0A087WXM4 84 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 A0A0A6YYD4 124 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 A0A0B4J203 849 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 TRAV1-2A0A0B4J238 106 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 hADV38S2A0JD32 116 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 TMEM14DPA8MWL7 114 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 SLC17A2O00624 439 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 CD36P16671 472 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 TGFBR1P36897 503 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 BLMHQ13867 455 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 GPR176Q14439 515 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 MPV17LQ2QL34 196 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 PRAMEF5Q5TYX0 476 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 OR13A1Q8NGR1 328 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 ZNF418Q8TF45 676 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-206ENST00000539417 CHCHD6Q9BRQ6 235 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 SUCNR1Q9BXA5 334 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 PLGRKTQ9HBL7 147 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 RCC2Q9P258 522 aaKnown RBP12.85□□□□□ -0.35
RPAIN-206ENST00000539417 V9GY05 133 aa12.85□□□□□ -0.35
RPAIN-206ENST00000539417 NPFFO15130 113 aa12.84□□□□□ -0.35
RPAIN-206ENST00000539417 CGB3P0DN86 165 aa12.84□□□□□ -0.35
RPAIN-206ENST00000539417 CGB7P0DN87 165 aa12.84□□□□□ -0.35
RPAIN-206ENST00000539417 IGHV1-8P0DP01 117 aa12.84□□□□□ -0.35
RPAIN-206ENST00000539417 GALP22466 123 aa12.84□□□□□ -0.35
RPAIN-206ENST00000539417 OMGP23515 440 aa12.84□□□□□ -0.35
RPAIN-206ENST00000539417 FGF9P31371 208 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-206ENST00000539417 RAB11BQ15907 218 aa12.84□□□□□ -0.35
RPAIN-206ENST00000539417 C17orf58Q2M2W7 97 aa12.84□□□□□ -0.35
RPAIN-206ENST00000539417 LDLRAD2Q5SZI1 272 aa12.84□□□□□ -0.35
RPAIN-206ENST00000539417 TRAPPC6BQ86SZ2 158 aa12.84□□□□□ -0.35
RPAIN-206ENST00000539417 OR51D1Q8NGF3 324 aa12.84□□□□□ -0.35
RPAIN-206ENST00000539417 TAF15Q92804 592 aaKnown RBP eCLIP12.84□□□□□ -0.35
RPAIN-206ENST00000539417 CORO2AQ92828 525 aa12.84□□□□□ -0.35
RPAIN-206ENST00000539417 MRPS24Q96EL2 167 aaKnown RBP12.84□□□□□ -0.35
RPAIN-206ENST00000539417 GHRLQ9UBU3 117 aa12.84□□□□□ -0.35
RPAIN-206ENST00000539417 MEIKINA0A087WXM9 373 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 FAM172BPA6NC97 362 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 DNAJC9-AS1A6NH13 148 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 CLEC2LP0C7M8 214 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 SAA4P35542 130 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 UBE2E1P51965 193 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 RPS27AP62979 156 aaKnown RBP12.83□□□□□ -0.36
RPAIN-206ENST00000539417 RAB12Q6IQ22 244 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 USP43Q70EL4 1123 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 C5orf24Q7Z6I8 188 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 LINC00596Q86U02 117 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 YIPF6Q96EC8 236 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 CENPOQ9BU64 300 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 LPAR5Q9H1C0 372 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 PRDM13Q9H4Q3 707 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 PCDHB16Q9NRJ7 776 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 UBE2J1Q9Y385 318 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-206ENST00000539417 PEX16Q9Y5Y5 336 aa12.83□□□□□ -0.36
RPAIN-206ENST00000539417 TRGV10A0A0A0MS01 117 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 LOC100506127A0A0U1RQW1 187 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 A0A1W2PPH5 198 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 BPNT1O95861 308 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 UBBP0CG47 229 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 SLC2A2P11168 524 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-206ENST00000539417 JUNBP17275 347 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-206ENST00000539417 RAB3BP20337 219 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 MYL9P24844 172 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 GLP1RP43220 463 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 SCGB2A2Q13296 93 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 C2orf76Q3KRA6 126 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 NCR3LG1Q68D85 454 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 FAM53AQ6NSI3 398 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-206ENST00000539417 UBALD1Q8TB05 177 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 MRGPRDQ8TDS7 321 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 CCDC107Q8WV48 283 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 CST11Q9H112 138 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 TNFRSF19Q9NS68 423 aa12.82□□□□□ -0.36
RPAIN-206ENST00000539417 SSR3Q9UNL2 185 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms