RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 Q6ZTK2 550 aa17.33■□□□□ 0.36
CCDC78-215ENST00000538176 CDH26Q8IXH8 852 aa17.33■□□□□ 0.36
CCDC78-215ENST00000538176 DYNAPQ8N1N2 210 aa17.33■□□□□ 0.36
CCDC78-215ENST00000538176 IFT22Q9H7X7 185 aa17.33■□□□□ 0.36
CCDC78-215ENST00000538176 ING4Q9UNL4 249 aa17.33■□□□□ 0.36
CCDC78-215ENST00000538176 PKD1L1Q8TDX9 2849 aa17.33■□□□□ 0.36
CCDC78-215ENST00000538176 KIAA2026Q5HYC2 2103 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 KBTBD11-OT1A0A1B0GTJ5 212 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 LEUTXA8MZ59 168 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 TOR1AO14656 332 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 MYL12BO14950 172 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 HTR3BO95264 441 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 IGFBP3P17936 291 aaPredicted RBP17.32■□□□□ 0.36
CCDC78-215ENST00000538176 BRS3P32247 399 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 EFNB2P52799 333 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 KRTAP10-3P60369 221 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 SLC34A1Q06495 639 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 OSR2Q8N2R0 312 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 TFAP2CQ92754 450 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 COQ2Q96H96 371 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 FOXJ3Q9UPW0 622 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 ST3GAL6Q9Y274 331 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 ERGIC3Q9Y282 383 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 HILPDAQ9Y5L2 63 aa17.32■□□□□ 0.36
CCDC78-215ENST00000538176 A6NDX4 124 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 F2RL2O00254 374 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 LALBAP00709 142 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 GNAO1P09471 354 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 FSTP19883 344 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 PAX6P26367 422 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 WNT4P56705 351 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 ATXN7L3Q14CW9 347 aaPredicted RBP17.31■□□□□ 0.36
CCDC78-215ENST00000538176 HERPUD1Q15011 391 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 RNLSQ5VYX0 342 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 C16orf82Q7Z2V1 217 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 BPIFB6Q8NFQ5 453 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 OR10A7Q8NGE5 316 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 OR4P4Q8NGL7 312 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 MRPS24Q96EL2 167 aaKnown RBP17.31■□□□□ 0.36
CCDC78-215ENST00000538176 AKR1E2Q96JD6 320 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 PGLYRP3Q96LB9 341 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 PRSS22Q9GZN4 317 aa17.31■□□□□ 0.36
CCDC78-215ENST00000538176 MEIKINA0A087WXM9 373 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 TRAV24A0A0B4J272 114 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 FAM90A22PA8MWA6 464 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 OOSP1A8MZH6 123 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 MMP23AO75900 390 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 IGLV1-47P01700 117 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 GTF2F2P13984 249 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 MAPK3P27361 379 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-215ENST00000538176 RAB13P51153 203 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 RPS11P62280 158 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCDC78-215ENST00000538176 C2orf68Q2NKX9 166 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 MPV17LQ2QL34 196 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 LDLRAD2Q5SZI1 272 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 PRAMEF5Q5TYX0 476 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 CCDC144NLQ6NUI1 221 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 SLC16A12Q6ZSM3 486 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 AHSA2Q719I0 299 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 Q8N2B8 174 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 ZNF184Q99676 751 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-215ENST00000538176 LINC00574Q9H8X3 128 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 TRRAPQ9Y4A5 3859 aa17.3■□□□□ 0.36
CCDC78-215ENST00000538176 XPNPEP2O43895 674 aa17.29■□□□□ 0.36
CCDC78-215ENST00000538176 CHST1O43916 411 aa17.29■□□□□ 0.36
CCDC78-215ENST00000538176 CDRT1O95170 752 aa17.29■□□□□ 0.36
CCDC78-215ENST00000538176 CGB3P0DN86 165 aa17.29■□□□□ 0.36
CCDC78-215ENST00000538176 CGB7P0DN87 165 aa17.29■□□□□ 0.36
CCDC78-215ENST00000538176 GZMHP20718 246 aa17.29■□□□□ 0.36
CCDC78-215ENST00000538176 OR3A4PP47883 348 aa17.29■□□□□ 0.36
CCDC78-215ENST00000538176 PLA1AQ53H76 456 aa17.29■□□□□ 0.36
CCDC78-215ENST00000538176 NANOGP1Q8N7R0 232 aa17.29■□□□□ 0.36
CCDC78-215ENST00000538176 OR9G1Q8NH87 305 aa17.29■□□□□ 0.36
CCDC78-215ENST00000538176 NKX3-1Q99801 234 aaPredicted RBP17.29■□□□□ 0.36
CCDC78-215ENST00000538176 SPACA1Q9HBV2 294 aa17.29■□□□□ 0.36
CCDC78-215ENST00000538176 ING3Q9NXR8 418 aa17.29■□□□□ 0.36
CCDC78-215ENST00000538176 OR7C1O76099 320 aaPredicted RBP17.28■□□□□ 0.36
CCDC78-215ENST00000538176 CELP19835 753 aa17.28■□□□□ 0.36
CCDC78-215ENST00000538176 RBM11P57052 281 aaKnown RBP17.28■□□□□ 0.36
CCDC78-215ENST00000538176 DOC2BQ14184 412 aa17.28■□□□□ 0.36
CCDC78-215ENST00000538176 C17orf58Q2M2W7 97 aa17.28■□□□□ 0.36
CCDC78-215ENST00000538176 HLA-DRB5Q30154 266 aa17.28■□□□□ 0.36
CCDC78-215ENST00000538176 PIGYQ3MUY2 71 aa17.28■□□□□ 0.36
CCDC78-215ENST00000538176 LAIR2Q6ISS4 152 aa17.28■□□□□ 0.36
CCDC78-215ENST00000538176 CCBE1Q6UXH8 406 aaPredicted RBP17.28■□□□□ 0.36
CCDC78-215ENST00000538176 MS4A15Q8N5U1 240 aa17.28■□□□□ 0.36
CCDC78-215ENST00000538176 OR10K1Q8NGX5 313 aa17.28■□□□□ 0.36
CCDC78-215ENST00000538176 MYDGFQ969H8 173 aa17.28■□□□□ 0.36
CCDC78-215ENST00000538176 DPCDQ9BVM2 203 aaPredicted RBP17.28■□□□□ 0.36
CCDC78-215ENST00000538176 FKBP14Q9NWM8 211 aa17.28■□□□□ 0.36
CCDC78-215ENST00000538176 SCN3BQ9NY72 215 aa17.28■□□□□ 0.36
CCDC78-215ENST00000538176 KIF25Q9UIL4 384 aa17.28■□□□□ 0.36
CCDC78-215ENST00000538176 AMMECR1Q9Y4X0 333 aaPredicted RBP17.28■□□□□ 0.36
CCDC78-215ENST00000538176 TRBV5-7A0A0A0MS05 114 aa17.27■□□□□ 0.36
CCDC78-215ENST00000538176 MEGF11A6BM72 1044 aa17.27■□□□□ 0.36
CCDC78-215ENST00000538176 BUB1B-PAK6H3BSN5 160 aa17.27■□□□□ 0.36
CCDC78-215ENST00000538176 HSPB6O14558 160 aa17.27■□□□□ 0.36
CCDC78-215ENST00000538176 MNDAP41218 407 aa17.27■□□□□ 0.36
CCDC78-215ENST00000538176 RSBN1Q5VWQ0 802 aaPredicted RBP17.27■□□□□ 0.36
CCDC78-215ENST00000538176 SUMF2Q8NBJ7 301 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms