RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 RAB12Q6IQ22 244 aa14.3□□□□□ -0.12
CCS-204ENST00000526066 SHISA2Q6UWI4 295 aa14.3□□□□□ -0.12
CCS-204ENST00000526066 OR56B1Q8NGI3 324 aa14.3□□□□□ -0.12
CCS-204ENST00000526066 GAFA1Q96PS6 74 aa14.3□□□□□ -0.12
CCS-204ENST00000526066 CCL13Q99616 98 aa14.3□□□□□ -0.12
CCS-204ENST00000526066 SLC6A7Q99884 636 aa14.3□□□□□ -0.12
CCS-204ENST00000526066 NUDT16L1Q9BRJ7 211 aaKnown RBP14.3□□□□□ -0.12
CCS-204ENST00000526066 NICN1Q9BSH3 213 aa14.3□□□□□ -0.12
CCS-204ENST00000526066 FAM234AQ9H0X4 552 aa14.3□□□□□ -0.12
CCS-204ENST00000526066 ATG5Q9H1Y0 275 aa14.3□□□□□ -0.12
CCS-204ENST00000526066 PATZ1Q9HBE1 687 aaKnown RBP14.3□□□□□ -0.12
CCS-204ENST00000526066 MAB21L2Q9Y586 359 aa14.3□□□□□ -0.12
CCS-204ENST00000526066 FOXI3A8MTJ6 420 aaPredicted RBP14.29□□□□□ -0.12
CCS-204ENST00000526066 RAB27BO00194 218 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 TMPRSS2O15393 492 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 ZNF737O75373 536 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 WNT2P09544 360 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 FUT3P21217 361 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 GATA3P23771 443 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 GABRR1P24046 479 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 PITPNBP48739 271 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 CEBPDP49716 269 aaPredicted RBP14.29□□□□□ -0.12
CCS-204ENST00000526066 VEGFCP49767 419 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 COL10A1Q03692 680 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 FOXL1Q12952 345 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 SIGIRRQ6IA17 410 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 LYPD2Q6UXB3 125 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 NLRC3Q7RTR2 1065 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 PPP1R35Q8TAP8 253 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 NEIL1Q96FI4 390 aaPredicted RBP14.29□□□□□ -0.12
CCS-204ENST00000526066 HSF4Q9ULV5 492 aa14.29□□□□□ -0.12
CCS-204ENST00000526066 TRAV24A0A0B4J272 114 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 K7N7A8 449 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 SIRPB1O00241 398 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 SLC33A1O00400 549 aaPredicted RBP14.28□□□□□ -0.12
CCS-204ENST00000526066 CTDSP2O14595 271 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 HPGDSO60760 199 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 PDCD6O75340 191 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 IGHV2-5P01817 119 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 TFF1P04155 84 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 RPS2P15880 293 aaKnown RBP14.28□□□□□ -0.12
CCS-204ENST00000526066 CHATP28329 748 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 BLVRBP30043 206 aaPredicted RBP14.28□□□□□ -0.12
CCS-204ENST00000526066 SCN1BQ07699 218 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 PDCD1Q15116 288 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 PRR31Q5SQ13 230 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 CMTM4Q8IZR5 234 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 OR8B3Q8NGG8 313 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 OR10R2Q8NGX6 335 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 S100A16Q96FQ6 103 aaKnown RBP14.28□□□□□ -0.12
CCS-204ENST00000526066 SNX22Q96L94 193 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 NEDD4LQ96PU5 975 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 OR8B2Q96RD0 313 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 PTTG2Q9NZH5 202 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 CTSZQ9UBR2 303 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 ADAM30Q9UKF2 790 aa14.28□□□□□ -0.12
CCS-204ENST00000526066 TMEM82A0PJX8 343 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 SOCS1O15524 211 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 RGS5O15539 181 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 PSPNO60542 156 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 CSN2P05814 226 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 EIF4EP06730 217 aaKnown RBP14.27□□□□□ -0.13
CCS-204ENST00000526066 KCNJ3P48549 501 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 TMEM50BP56557 158 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 ARL6IP1Q15041 203 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 C17orf107Q6ZR85 190 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 FAM216BQ8N7L0 139 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 ASCC1Q8N9N2 400 aaKnown RBP14.27□□□□□ -0.13
CCS-204ENST00000526066 SUMF2Q8NBJ7 301 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 ZNRF1Q8ND25 227 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 OR5D13Q8NGL4 314 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 PHF21AQ96BD5 680 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 ZNF747Q9BV97 191 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 DPCDQ9BVM2 203 aaPredicted RBP14.27□□□□□ -0.13
CCS-204ENST00000526066 C6orf62Q9GZU0 229 aaPredicted RBP14.27□□□□□ -0.13
CCS-204ENST00000526066 MIXL1Q9H2W2 232 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 DIABLOQ9NR28 239 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 ZNF581Q9P0T4 197 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 PEX16Q9Y5Y5 336 aa14.27□□□□□ -0.13
CCS-204ENST00000526066 WNK2Q9Y3S1 2297 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 A0A1B0GW55 424 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 GPR37O15354 613 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 NDUFB3O43676 98 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 TK1P04183 234 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 DUX4L2P0CJ85 424 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 DUX4L3P0CJ86 424 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 DUX4L4P0CJ87 422 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 DUX4L5P0CJ88 424 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 DUX4L6P0CJ89 424 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 DUX4L7P0CJ90 424 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 ELK1P19419 428 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 OR3A1P47881 315 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 NPY4RP50391 375 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 UBA52P62987 128 aaKnown RBP14.26□□□□□ -0.13
CCS-204ENST00000526066 PAX5Q02548 391 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 RBM39Q14498 530 aaKnown RBP14.26□□□□□ -0.13
CCS-204ENST00000526066 C11orf91Q3C1V1 193 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 MOGAT2Q3SYC2 334 aa14.26□□□□□ -0.13
CCS-204ENST00000526066 PAN3Q58A45 887 aaKnown RBP14.26□□□□□ -0.13
CCS-204ENST00000526066 LRRC10Q5BKY1 277 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms