RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 HHLA3Q9XRX5 114 aa-1.78□□□□□ -2.69
SCARNA23-201ENST00000516060 RHBDD3Q9Y3P4 386 aa-1.78□□□□□ -2.69
SCARNA23-201ENST00000516060 MTCH2Q9Y6C9 303 aa-1.78□□□□□ -2.69
SCARNA23-201ENST00000516060 U3KQV3 271 aa-1.78□□□□□ -2.69
SCARNA23-201ENST00000516060 EP300Q09472 2414 aaPredicted RBP-1.78□□□□□ -2.69
SCARNA23-201ENST00000516060 EML6Q6ZMW3 1958 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 ADGRB2O60241 1585 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 KIF16BQ96L93 1317 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 IGHV1-45A0A0A0MS14 117 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 SNTNA6NMZ2 147 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 CLDN25C9JDP6 229 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 NDUFS5O43920 106 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 SERPINA3P01011 423 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 ZNF728P0DKX0 622 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 MCF2P10911 925 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 ZNF25P17030 456 aaPredicted RBP-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 SLCO1A2P46721 670 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 ACTR3P61158 418 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 FGL1Q08830 312 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 IFFO1Q0D2I5 559 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 TSPAN31Q12999 210 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 TRAM2Q15035 370 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 TAL2Q16559 108 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 ASB16-AS1Q495Z4 193 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 OR2T5Q6IEZ7 315 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 SLC36A1Q7Z2H8 476 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 KTN1-AS1Q86SY8 53 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 OR4K2Q8NGD2 314 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 OR2T29Q8NH02 315 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 KCTD4Q8WVF5 259 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 DYNLL2Q96FJ2 89 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 TBX5Q99593 518 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 TMEM175Q9BSA9 504 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 DOHHQ9BU89 302 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 ZNF436Q9C0F3 470 aaPredicted RBP-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 PLEKHA1Q9HB21 404 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 RPRD1BQ9NQG5 326 aaKnown RBP-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 PTBP2Q9UKA9 531 aaKnown RBP-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 INSIG2Q9Y5U4 225 aa-1.79□□□□□ -2.7
SCARNA23-201ENST00000516060 UBR4Q5T4S7 5183 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 EPPK1P58107 5090 aaKnown RBP-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 IGHV3OR15-7A0A075B7D8 119 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 SLC5A10A0PJK1 596 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 DNAJB6O75190 326 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 LSM8O95777 96 aaKnown RBP-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 ZNF682O95780 498 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 SERPINA7P05543 415 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 DBTP11182 482 aaKnown RBP-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 ZNF3P17036 446 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 ARF4P18085 180 aaPredicted RBP-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 HLA-DPA1P20036 260 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 AQP4P55087 323 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 OR2B8PP59922 312 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 PMVKQ15126 192 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 CHCHD2P9Q5T1J5 151 aaPredicted RBP-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 C9orf163Q8N9P6 203 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 OR10A6Q8NH74 314 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 BORCS5Q969J3 196 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 QKIQ96PU8 341 aaKnown RBP eCLIP-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 FAM111AQ96PZ2 611 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 PRO0628Q9UI54 55 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 AP3M1Q9Y2T2 418 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 LHFPL6Q9Y693 200 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 SETD2Q9BYW2 2564 aaPredicted RBP-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 PTPRQQ9UMZ3 2332 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 SMARCA4P51532 1647 aa-1.8□□□□□ -2.7
SCARNA23-201ENST00000516060 POLR3AO14802 1390 aaPredicted RBP-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 USP47Q96K76 1375 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 LOC389332A0A1B0GUA5 103 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 M0QXV9 152 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 UBFD1O14562 309 aaKnown RBP-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 TOR1AO14656 332 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 SLC9A3R1O14745 358 aaPredicted RBP-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 DENRO43583 198 aaKnown RBP-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 AK1P00568 194 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 PSMB2P49721 201 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 CCDC183Q5T5S1 534 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 PRAMEF20Q5VT98 475 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 IQCKQ8N0W5 287 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 KIF2BQ8N4N8 673 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 OR11H1Q8NG94 326 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 ASZ1Q8WWH4 475 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 SMIM8Q96KF7 97 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 NINJ2Q9NZG7 142 aa-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 C14orf166Q9Y224 244 aaKnown RBP-1.81□□□□□ -2.7
SCARNA23-201ENST00000516060 TRGV5A0A0B4J1U4 118 aa-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 IGKV1-12A0A0C4DH73 117 aa-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 HMSDA8MTL9 139 aa-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 M0R2N4 97 aa-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 SYNGR1O43759 233 aa-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 UPK1BO75841 260 aa-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 TDP2O95551 362 aa-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 IGKV1D-12P01611 117 aa-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 ANXA5P08758 320 aa-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 IGHV3-30-3P0DP02 117 aa-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 RAB5AP20339 215 aa-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 ZNF93P35789 620 aaPredicted RBP-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 CRYBB2P43320 205 aa-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 SPINT3P49223 89 aa-1.82□□□□□ -2.7
SCARNA23-201ENST00000516060 AP1S2P56377 157 aa-1.82□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms