RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 GATA3P23771 443 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 ERP29P30040 261 aaKnown RBP6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 OR3A1P47881 315 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 DVL1P1P54792 670 aaPredicted RBP6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 LCN2P80188 198 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 PAX5Q02548 391 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 RBM39Q14498 530 aaKnown RBP6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 ATXN7L3Q14CW9 347 aaPredicted RBP6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 PDCD1Q15116 288 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 GRK1Q15835 563 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 ATAD3CQ5T2N8 411 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 CYB5R2Q6BCY4 276 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 RAB12Q6IQ22 244 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 SHISA2Q6UWI4 295 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 GLCCI1Q86VQ1 547 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 FGFRL1Q8N441 504 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM89BQ8N5H3 189 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 SUMF2Q8NBJ7 301 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 OR4S1Q8NGB4 309 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 OR56B1Q8NGI3 324 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 C8orf46Q8TAG6 207 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 DYNC2LI1Q8TCX1 351 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 NEK7Q8TDX7 302 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 ACOT12Q8WYK0 555 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 H1FXQ92522 213 aaKnown RBP6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 TMEM186Q96B77 213 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 NEDD4LQ96PU5 975 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 NICN1Q9BSH3 213 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 DCTN5Q9BTE1 182 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 DPCDQ9BVM2 203 aaPredicted RBP6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 BARHL1Q9BZE3 327 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 CHST6Q9GZX3 395 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 SHARPINQ9H0F6 387 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 LPAR2Q9HBW0 351 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 RHBDL2Q9NX52 303 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 LPAR3Q9UBY5 353 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 RPUSD1Q9UJJ7 312 aaKnown RBP6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 HIVEP1P15822 2718 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 SONP18583 2426 aaKnown RBP6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 HIVEP2P31629 2446 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 NAV3Q8IVL0 2385 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 LOC105371242A0A075B767 164 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 A0A0A6YYD4 124 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 IGHV2-70DA0A0C4DH43 119 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 A0A0G2JMP0 313 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 A0A0X1KG70 313 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 FOXI3A8MTJ6 420 aaPredicted RBP6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 C22orf46C9J442 243 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 MCRIP1C9JLW8 97 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 HSPB6O14558 160 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 CD5LO43866 347 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 CA11O75493 328 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 TGFAP01135 160 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 LIPFP07098 398 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 ZNF182P17025 639 aaPredicted RBP6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 ZFP36P26651 326 aaKnown RBP6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 CHATP28329 748 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 BLVRBP30043 206 aaPredicted RBP6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 VEGFCP49767 419 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 EFNB2P52799 333 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 EDDM3BP56851 147 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 RPL31P62899 125 aaKnown RBP6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 PAX2Q02962 417 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 KRTAP1-1Q07627 177 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 PLA2G7Q13093 441 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 EDDM3AQ14507 147 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 ARL6IP1Q15041 203 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 UBE2NLQ5JXB2 153 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 NKAPLQ5M9Q1 402 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 SIGIRRQ6IA17 410 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 MZT2AQ6P582 158 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 BTNL3Q6UXE8 466 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 BTN2A1Q7KYR7 527 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 BIVMQ86UB2 503 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 OR4M2Q8NGB6 313 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 OR5H6Q8NGV6 325 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 RAB40AQ8WXH6 277 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 DACT3Q96B18 629 aaPredicted RBP6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 PHF21AQ96BD5 680 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 DGCR14Q96DF8 476 aaKnown RBP6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 SLC25A38Q96DW6 304 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 NUDT16L1Q9BRJ7 211 aaKnown RBP6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 ATG5Q9H1Y0 275 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 PLEKHJ1Q9NW61 149 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 ZNF581Q9P0T4 197 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 HSF4Q9ULV5 492 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 PEX16Q9Y5Y5 336 aa6.27□□□□□ -1.41
HMGXB3-204ENST00000513318 A0A0A6YYH2 397 aa6.26□□□□□ -1.41
HMGXB3-204ENST00000513318 A0A1W2PPH5 198 aa6.26□□□□□ -1.41
HMGXB3-204ENST00000513318 A0A1W2PQ09 198 aa6.26□□□□□ -1.41
HMGXB3-204ENST00000513318 hADV38S2A0JD32 116 aa6.26□□□□□ -1.41
HMGXB3-204ENST00000513318 A6NJ64 397 aa6.26□□□□□ -1.41
HMGXB3-204ENST00000513318 J3QLI3 93 aa6.26□□□□□ -1.41
HMGXB3-204ENST00000513318 RAB27BO00194 218 aa6.26□□□□□ -1.41
HMGXB3-204ENST00000513318 SOCS1O15524 211 aa6.26□□□□□ -1.41
HMGXB3-204ENST00000513318 PPIAL4GP0DN37 164 aa6.26□□□□□ -1.41
HMGXB3-204ENST00000513318 P2RX3P56373 397 aa6.26□□□□□ -1.41
HMGXB3-204ENST00000513318 MEF2CQ06413 473 aaPredicted RBP6.26□□□□□ -1.41
HMGXB3-204ENST00000513318 AESQ08117 197 aa6.26□□□□□ -1.41
HMGXB3-204ENST00000513318 KRBOX4Q5JUW0 171 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms