RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 NUP50Q9UKX7 468 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 UBE2J1Q9Y385 318 aaPredicted RBP10.58□□□□□ -0.72
COL6A6-203ENST00000511332 TRGV10A0A0A0MS01 117 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 ODAMA1E959 279 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 PDCD6O75340 191 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 IFNA2P01563 188 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 ZNF728P0DKX0 622 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 HOXB4P17483 251 aaPredicted RBP10.57□□□□□ -0.72
COL6A6-203ENST00000511332 SDC2P34741 201 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 BPIFB3P59826 476 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 QRFPP83859 136 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 AESQ08117 197 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 FAM189A2Q15884 450 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 KLF17Q5JT82 389 aaPredicted RBP10.57□□□□□ -0.72
COL6A6-203ENST00000511332 RAB12Q6IQ22 244 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 TPRX1Q8N7U7 411 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 OR51D1Q8NGF3 324 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 COQ2Q96H96 371 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 ZNF714Q96N38 554 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 FUNDC2Q9BWH2 189 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 TM2D1Q9BX74 207 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 BARHL1Q9BZE3 327 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 GAL3ST2Q9H3Q3 398 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 KCNK15Q9H427 330 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 NCOR1P1Q9H4R4 102 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 UNKLQ9H9P5 680 aaKnown RBP10.57□□□□□ -0.72
COL6A6-203ENST00000511332 LIN7BQ9HAP6 207 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 SIRT7Q9NRC8 400 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 OR6C3Q9NZP0 311 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 SVEP1Q4LDE5 3571 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 KIAA2026Q5HYC2 2103 aa10.57□□□□□ -0.72
COL6A6-203ENST00000511332 NIPBLQ6KC79 2804 aaeCLIP10.56□□□□□ -0.72
COL6A6-203ENST00000511332 SMIM30A4D0T7 59 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 MCRIP1C9JLW8 97 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 CLPXO76031 633 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 GLAP06280 429 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 CCL3L1P16619 93 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 FUT3P21217 361 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 PRTN3P24158 256 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 FPR2P25090 351 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 GLIPR1P48060 266 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 CLDN12P56749 244 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 ERVFRD-1P60508 538 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 OR10K2Q6IF99 312 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 SFXN4Q6P4A7 337 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 TCF23Q7RTU1 214 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 GPR141Q7Z602 305 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 NR2C2APQ86WQ0 139 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 BPIFB2Q8N4F0 458 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 Q8N7P7 452 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 LHX4Q969G2 390 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 NEDD4LQ96PU5 975 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 TAS2R3Q9NYW6 316 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 ZNF581Q9P0T4 197 aa10.56□□□□□ -0.72
COL6A6-203ENST00000511332 MEIKINA0A087WXM9 373 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 TMEM30CPA0ZSE6 113 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 C17orf98A8MV24 154 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 TMEM127O75204 238 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 CA11O75493 328 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 IGHV4-38-2P0DP08 117 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 GLP1RP43220 463 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 ALDH3B2P48448 385 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 MXD1Q05195 221 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 RSBN1Q5VWQ0 802 aaPredicted RBP10.55□□□□□ -0.72
COL6A6-203ENST00000511332 SLC35E4Q6ICL7 350 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 C9orf139Q6ZV77 190 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 CROCCP3Q8IVE0 287 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 PLPPR1Q8TBJ4 325 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 CORO2AQ92828 525 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 MS4A7Q9GZW8 240 aaPredicted RBP10.55□□□□□ -0.72
COL6A6-203ENST00000511332 RNF167Q9H6Y7 350 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 ING3Q9NXR8 418 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 KIF25Q9UIL4 384 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 PEX16Q9Y5Y5 336 aa10.55□□□□□ -0.72
COL6A6-203ENST00000511332 NF1P21359 2839 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 IGHV3OR16-10A0A075B7F0 116 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 IGHV1-69DA0A0B4J2H0 117 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 CENPVL3A0A0U1RRI6 287 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 TMEM272A0A1B0GTI8 110 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 ZNF729A6NN14 1252 aaPredicted RBP10.54□□□□□ -0.72
COL6A6-203ENST00000511332 LDLRAD4O15165 306 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 GABARAPO95166 117 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 IGHV1-69P01742 117 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 TFAP2AP05549 437 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 RAB6AP20340 208 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 CHATP28329 748 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 DLX6P56179 175 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 SCAND1P57086 179 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 LSM3P62310 102 aaKnown RBP10.54□□□□□ -0.72
COL6A6-203ENST00000511332 C2orf76Q3KRA6 126 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 NKAPLQ5M9Q1 402 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 SIGIRRQ6IA17 410 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 ZNF497Q6ZNH5 498 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 ZNF565Q8N9K5 539 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 OR56B1Q8NGI3 324 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 PTX4Q96A99 478 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 NICN1Q9BSH3 213 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 SUCNR1Q9BXA5 334 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 LPAR5Q9H1C0 372 aa10.54□□□□□ -0.72
COL6A6-203ENST00000511332 HEXA-AS1Q9H8Q6 139 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms