RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SLC35D3Q5M8T2 416 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 SLC35F1Q5T1Q4 408 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 SLC18B1Q6NT16 456 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 DRAM2Q6UX65 266 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 PTCHD4Q6ZW05 846 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF767PQ75MW2 155 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 SHFQ7M4L6 423 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 DCXRQ7Z4W1 244 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 THAP5Q7Z6K1 395 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 TGIF2LXQ8IUE1 241 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.43□□□□□ -2.02
TCOF1-208ENST00000506063 LNX2Q8N448 690 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF561Q8N587 486 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 IQCF1Q8N6M8 205 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 CYB561A3Q8NBI2 242 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 SLC37A3Q8NCC5 494 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 OR8D4Q8NGM9 314 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 OR9G4Q8NGQ1 327 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 OR56B4Q8NH76 319 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 FAM81AQ8TBF8 368 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 CANT1Q8WVQ1 401 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 RPL3LQ92901 407 aaKnown RBP2.43□□□□□ -2.02
TCOF1-208ENST00000506063 NRBF2Q96F24 287 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 MRPL48Q96GC5 212 aaKnown RBP2.43□□□□□ -2.02
TCOF1-208ENST00000506063 OR8B4Q96RC9 309 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 MYCBPQ99417 103 aaPredicted RBP2.43□□□□□ -2.02
TCOF1-208ENST00000506063 CNN2Q99439 309 aaKnown RBP2.43□□□□□ -2.02
TCOF1-208ENST00000506063 FEVQ99581 238 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 NIPSNAP1Q9BPW8 284 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 FUZQ9BT04 418 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 RNF126Q9BV68 326 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 ELOVL1Q9BW60 279 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 PAPOLGQ9BWT3 736 aaKnown RBP2.43□□□□□ -2.02
TCOF1-208ENST00000506063 OSBPL10Q9BXB5 764 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 GABARAPL1Q9H0R8 117 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 OR51V1Q9H2C8 321 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 RIBC2Q9H4K1 309 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 MOB1AQ9H8S9 216 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 PLEKHA1Q9HB21 404 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 SLC25A19Q9HC21 320 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 ABCB9Q9NP78 766 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 PNRC2Q9NPJ4 139 aaKnown RBP2.43□□□□□ -2.02
TCOF1-208ENST00000506063 ZC4H2Q9NQZ6 224 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 LIN7CQ9NUP9 197 aaKnown RBP2.43□□□□□ -2.02
TCOF1-208ENST00000506063 C14orf119Q9NWQ9 140 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 ETAA1Q9NY74 926 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 IL20Q9NYY1 176 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 SLC23A1Q9UHI7 598 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 LAMP5Q9UJQ1 280 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 IKZF2Q9UKS7 526 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 GTF2A1LQ9UNN4 478 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 COA3Q9Y2R0 106 aaPredicted RBP2.43□□□□□ -2.02
TCOF1-208ENST00000506063 AP4S1Q9Y587 144 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 LHFPL6Q9Y693 200 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 TMEM14AQ9Y6G1 99 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 SESN1Q9Y6P5 492 aa2.43□□□□□ -2.02
TCOF1-208ENST00000506063 OR6C68A6NDL8 312 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 GGT3PA6NGU5 568 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 TVP23AA6NH52 213 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 SAC3D1A6NKF1 404 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 FAM183AA6NL82 134 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 RFPL4AA6NLU0 287 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 ANKRD30BLA7E2S9 258 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 LEUTXA8MZ59 168 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 OOSP1A8MZH6 123 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 C11orf94C9JXX5 98 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 RFPL4AL1F8VTS6 287 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 FAM229AH3BQW9 127 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 BUB1B-PAK6H3BSN5 160 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 GSC2O15499 205 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 GASTP01350 101 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 LCATP04180 440 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 TK1P04183 234 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 HSPB1P04792 205 aaKnown RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 GYPBP06028 91 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 MRPL3P09001 348 aaKnown RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 H2BFMP0C1H6 154 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 OCM2P0CE71 109 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 OCMP0CE72 109 aaPredicted RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 T-ENOLP0DO92 83 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 EGR2P11161 476 aaPredicted RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 TMEM11P17152 192 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 ATP6V1E1P36543 226 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 CDKN2AP42771 156 aaKnown RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 NPBWR2P48146 333 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 RIDAP52758 137 aaKnown RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 HMGA2P52926 109 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 FXYD6P3P58550 94 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 ACTR3P61158 418 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 MS4A2Q01362 244 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 RAB40BQ12829 278 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 PPP1R8Q12972 351 aaKnown RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 FHL1Q13642 323 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 APOFQ13790 326 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 HNF4GQ14541 408 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 KCNMB1Q16558 191 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 HLA-DRB5Q30154 266 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 CD300EQ496F6 205 aaPredicted RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 GLYATL3Q5SZD4 288 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 CORO6Q6QEF8 472 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms