RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 KPTNQ9Y664 436 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 NIPBLQ6KC79 2804 aaeCLIP9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 TMEM272A0A1B0GTI8 110 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 A0A1W2PPH5 198 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 A0A1W2PQ09 198 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 SMIM30A4D0T7 59 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 M0R1W7 72 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 TMEM127O75204 238 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 IL1AP01583 271 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 GLAP06280 429 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 SLC2A2P11168 524 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 MMP9P14780 707 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 FUT3P21217 361 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 P2RX3P56373 397 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 EDDM3BP56851 147 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 LSM3P62310 102 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 ARF6P62330 175 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 MXD1Q05195 221 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 EDDM3AQ14507 147 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 CTF1Q16619 201 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 ATAD3CQ5T2N8 411 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 GPR107Q5VW38 600 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 TMEM200BQ69YZ2 307 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 SIGIRRQ6IA17 410 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 SFXN4Q6P4A7 337 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 C1orf122Q6ZSJ8 110 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 CROCCP3Q8IVE0 287 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 CMTM4Q8IZR5 234 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 FAM89BQ8N5H3 189 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 OR4M1Q8NGD0 313 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 UPRTQ96BW1 309 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 COQ2Q96H96 371 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 WDFY2Q96P53 400 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 URM1Q9BTM9 101 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 DPCDQ9BVM2 203 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 NAA50Q9GZZ1 169 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 SIRPDQ9H106 197 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 KCNK15Q9H427 330 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 NCOR1P1Q9H4R4 102 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 LIN7BQ9HAP6 207 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 RAB22AQ9UL26 194 aa9.8□□□□□ -0.84
PDLIM5-208ENST00000504489 hADV38S2A0JD32 116 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 MCRIP1C9JLW8 97 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 HSPB6O14558 160 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 PDCD6O75340 191 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 CRLF1O75462 422 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 TOX4O94842 621 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 FSHBP01225 129 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 RAB6AP20340 208 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 TGFBR1P36897 503 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 RPS19P39019 145 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 SCAND1P57086 179 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 VBP1P61758 197 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 NCS1P62166 190 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 AESQ08117 197 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 BLMHQ13867 455 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 RBM39Q14498 530 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 FAM189A2Q15884 450 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 KRBOX4Q5JUW0 171 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 METTL11BQ5VVY1 283 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 SLC35E4Q6ICL7 350 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 RAB12Q6IQ22 244 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 FAM185AQ8N0U4 392 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 BPIFB2Q8N4F0 458 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 NANPQ8TBE9 248 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 CORO2AQ92828 525 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 PTX4Q96A99 478 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 BEX2Q9BXY8 128 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 BARHL1Q9BZE3 327 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 LPAR5Q9H1C0 372 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 ONECUT1Q9UBC0 465 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 DAPK2Q9UIK4 370 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 PEX16Q9Y5Y5 336 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 LINC00312Q9Y6C7 94 aa9.79□□□□□ -0.84
PDLIM5-208ENST00000504489 A0A0A6YYD4 124 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 A0A0B4J203 849 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 ODAMA1E959 279 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 CHATP28329 748 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 GLIPR1P48060 266 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 SERPINB10P48595 397 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 DLX6P56179 175 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 ZNF273Q14593 569 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 ATXN7L3Q14CW9 347 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 CHRFAM7AQ494W8 412 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 RSBN1Q5VWQ0 802 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 TCF23Q7RTU1 214 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 C11orf42Q8N5U0 333 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 Q8N7P7 452 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 TPRX1Q8N7U7 411 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 PLPPR1Q8TBJ4 325 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 TBX15Q96SF7 602 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 BCL7BQ9BQE9 202 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 NICN1Q9BSH3 213 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 METTL8Q9H825 291 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 UNKLQ9H9P5 680 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 OR6C3Q9NZP0 311 aa9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 UBE2J1Q9Y385 318 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-208ENST00000504489 SETD2Q9BYW2 2564 aaPredicted RBP9.77□□□□□ -0.84
PDLIM5-208ENST00000504489 TRGV10A0A0A0MS01 117 aa9.77□□□□□ -0.85
PDLIM5-208ENST00000504489 hCG_1809904A0A1W2PP81 198 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms