RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 MGST3O14880 152 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 ENSAO43768 121 aaKnown RBP8.29□□□□□ -1.08
NUP54-203ENST00000504173 PSPNO60542 156 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 TMEM127O75204 238 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 PAHP00439 452 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 RAB6AP20340 208 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 RORCP51449 518 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 DVL1P1P54792 670 aaPredicted RBP8.29□□□□□ -1.08
NUP54-203ENST00000504173 EDDM3BP56851 147 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 SCAND1P57086 179 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 PLA2G7Q13093 441 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 ATXN7L3Q14CW9 347 aaPredicted RBP8.29□□□□□ -1.08
NUP54-203ENST00000504173 SPCS2Q15005 226 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 FAM189A2Q15884 450 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 C11orf91Q3C1V1 193 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 NKAPLQ5M9Q1 402 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 PRR31Q5SQ13 230 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 BTNL3Q6UXE8 466 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 OR4S1Q8NGB4 309 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 NEDD4LQ96PU5 975 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 NUDT16L1Q9BRJ7 211 aaKnown RBP8.29□□□□□ -1.08
NUP54-203ENST00000504173 NICN1Q9BSH3 213 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 DCTN5Q9BTE1 182 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 MRI1Q9BV20 369 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 DPCDQ9BVM2 203 aaPredicted RBP8.29□□□□□ -1.08
NUP54-203ENST00000504173 TM2D1Q9BX74 207 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 SHARPINQ9H0F6 387 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 LPAR5Q9H1C0 372 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 SPACA1Q9HBV2 294 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 MMP26Q9NRE1 261 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 HIF1ANQ9NWT6 349 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 ABRACLQ9P1F3 81 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 RPUSD1Q9UJJ7 312 aaKnown RBP8.29□□□□□ -1.08
NUP54-203ENST00000504173 KCNS2Q9ULS6 477 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 POLR3KQ9Y2Y1 108 aaPredicted RBP8.29□□□□□ -1.08
NUP54-203ENST00000504173 PEX16Q9Y5Y5 336 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 ETV7Q9Y603 341 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 TRBV23-1A0A0A0MS06 115 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 A0A0A6YYD4 124 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 PPIAL4CA0A0B4J2A2 164 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 A0A0G2JMP0 313 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 A0A0X1KG70 313 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 SMIM31A0A1B0GVY4 71 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 A0A1W2PQ09 198 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 FUOMA2VDF0 154 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 MCRIP1C9JLW8 97 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 PDCD6O75340 191 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 CSN2P05814 226 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 FUT3P21217 361 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 BLVRBP30043 206 aaPredicted RBP8.28□□□□□ -1.08
NUP54-203ENST00000504173 SOX6P35712 828 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 KCNJ3P48549 501 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 VEGFCP49767 419 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 EFNB2P52799 333 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 RPL31P62899 125 aaKnown RBP8.28□□□□□ -1.08
NUP54-203ENST00000504173 DCAF12L2Q5VW00 463 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 RAB12Q6IQ22 244 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 FAM185AQ8N0U4 392 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 BPIFB2Q8N4F0 458 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 OR4M2Q8NGB6 313 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 OR4M1Q8NGD0 313 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 OR56B1Q8NGI3 324 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 OR5H6Q8NGV6 325 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 RAB40AQ8WXH6 277 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 AP3S1Q92572 193 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 PTX4Q96A99 478 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 KCTD12Q96CX2 325 aaKnown RBP8.28□□□□□ -1.08
NUP54-203ENST00000504173 BARHL1Q9BZE3 327 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 RBM38Q9H0Z9 239 aaKnown RBP8.28□□□□□ -1.08
NUP54-203ENST00000504173 ING3Q9NXR8 418 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 RCC2Q9P258 522 aaKnown RBP8.28□□□□□ -1.08
NUP54-203ENST00000504173 RSL24D1Q9UHA3 163 aaKnown RBP8.28□□□□□ -1.08
NUP54-203ENST00000504173 ARHGAP32A7KAX9 2087 aa8.28□□□□□ -1.08
NUP54-203ENST00000504173 DPPA5A6NC42 116 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 METTL21EPA6NDL7 271 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 SOCS1O15524 211 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 LIPFP07098 398 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 PPIAL4GP0DN37 164 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 ZNF182P17025 639 aaPredicted RBP8.27□□□□□ -1.09
NUP54-203ENST00000504173 GATA3P23771 443 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 CHATP28329 748 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 ERP29P30040 261 aaKnown RBP8.27□□□□□ -1.09
NUP54-203ENST00000504173 P2RX3P56373 397 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 PAX2Q02962 417 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 AESQ08117 197 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 RBM39Q14498 530 aaKnown RBP8.27□□□□□ -1.09
NUP54-203ENST00000504173 KRBOX4Q5JUW0 171 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 SIGIRRQ6IA17 410 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 BRICD5Q6PL45 260 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 FAM89BQ8N5H3 189 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 TPRX1Q8N7U7 411 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 ACOT12Q8WYK0 555 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 COQ2Q96H96 371 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 ATG5Q9H1Y0 275 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 C19orf12Q9NSK7 152 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 PLEKHJ1Q9NW61 149 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 RHBDL2Q9NX52 303 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 ETAA1Q9NY74 926 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 NDUFA13Q9P0J0 144 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 ONECUT1Q9UBC0 465 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms