RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 A0A1W2PPE3 182 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 GNGT2O14610 69 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 IGHG4P01861 327 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 KRT8P05787 483 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 OSMP13725 252 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 CDK5Q00535 292 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 CATSPERDQ86XM0 798 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 DEFB107AQ8IZN7 70 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 RNF152Q8N8N0 203 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 Q8N9W7 124 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 OR2T10Q8NGZ9 312 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 DCUN1D4Q92564 292 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 COQ2Q96H96 371 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 EAF1Q96JC9 268 aaPredicted RBP9.08□□□□□ -0.96
CDK9-205ENST00000498339 KCTD7Q96MP8 289 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 HSPB9Q9BQS6 159 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 GHITMQ9H3K2 345 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 GNB4Q9HAV0 340 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 IDI2-AS1Q9NZ38 188 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 ACTR3BQ9P1U1 418 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 PSG11Q9UQ72 335 aa9.08□□□□□ -0.96
CDK9-205ENST00000498339 MEIKINA0A087WXM9 373 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 IGHV1-3A0A0C4DH29 117 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 CST1P01037 141 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 GAPDHP04406 335 aaKnown RBP9.07□□□□□ -0.96
CDK9-205ENST00000498339 CSN2P05814 226 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 OR5H8P0DN80 308 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 IGHV4-30-4P0DP06 118 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 ZNF20P17024 532 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 VEGFCP49767 419 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 MNAT1P51948 309 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 ISL1P61371 349 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 GNB1P62873 340 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 Q6ZSR3 168 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 LHFPL2Q6ZUX7 228 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 ZNF565Q8N9K5 539 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 CHST4Q8NCG5 386 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 OR5D18Q8NGL1 313 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 RFESDQ8TAC1 157 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 PP6455Q8WZ26 134 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 ST6GALNAC6Q969X2 333 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 TBX5Q99593 518 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 SPATA25Q9BR10 227 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 ARGLU1Q9NWB6 273 aaPredicted RBP9.07□□□□□ -0.96
CDK9-205ENST00000498339 MRM2Q9UI43 246 aaKnown RBP9.07□□□□□ -0.96
CDK9-205ENST00000498339 VSIG4Q9Y279 399 aa9.07□□□□□ -0.96
CDK9-205ENST00000498339 FRAS1Q86XX4 4008 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 LOC107986453A0A1B0GWG9 222 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 TCRBV5S2A0A599 114 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 SLC33A1O00400 549 aaPredicted RBP9.06□□□□□ -0.96
CDK9-205ENST00000498339 DEGS1O15121 323 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 IL1AP01583 271 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 IFNA6P05013 189 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 PRKACBP22694 351 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 MYF6P23409 242 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 PSMB8P28062 276 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 C21orf33P30042 268 aaPredicted RBP9.06□□□□□ -0.96
CDK9-205ENST00000498339 SOX6P35712 828 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 ZP1P60852 638 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 CFHR3Q02985 330 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 PDZK1IP1Q13113 114 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 GK3PQ14409 553 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 ASPHD1Q5U4P2 390 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 FAM53AQ6NSI3 398 aaPredicted RBP9.06□□□□□ -0.96
CDK9-205ENST00000498339 SGPP2Q8IWX5 399 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 IZUMO1Q8IYV9 350 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 DNAAF1Q8NEP3 725 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 OR13A1Q8NGR1 328 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 MRGPRDQ8TDS7 321 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 UBE2E2Q96LR5 201 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 OPALINQ96PE5 141 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 SPACA5Q96QH8 159 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 MNTQ99583 582 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 COMMD4Q9H0A8 199 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 CLN6Q9NWW5 311 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 NDE1Q9NXR1 346 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 H2AFY2Q9P0M6 372 aaPredicted RBP9.06□□□□□ -0.96
CDK9-205ENST00000498339 KIF25Q9UIL4 384 aa9.06□□□□□ -0.96
CDK9-205ENST00000498339 PCLOQ9Y6V0 5065 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 RBMY1BA6NDE4 496 aaKnown RBP9.05□□□□□ -0.96
CDK9-205ENST00000498339 RBMY1EA6NEQ0 496 aaKnown RBP9.05□□□□□ -0.96
CDK9-205ENST00000498339 MOSP00540 346 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 RBMY1DP0C7P1 496 aaKnown RBP9.05□□□□□ -0.96
CDK9-205ENST00000498339 UBCP0CG48 685 aaKnown RBP9.05□□□□□ -0.96
CDK9-205ENST00000498339 SLC2A2P11168 524 aaPredicted RBP9.05□□□□□ -0.96
CDK9-205ENST00000498339 ATF1P18846 271 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 SSTR5P35346 364 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 SLURP1P55000 103 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 PITPNAQ00169 270 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 ZNF816Q0VGE8 651 aaPredicted RBP9.05□□□□□ -0.96
CDK9-205ENST00000498339 PAN3Q58A45 887 aaKnown RBP9.05□□□□□ -0.96
CDK9-205ENST00000498339 SSX6Q7RTT6 188 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 BCDIN3DQ7Z5W3 292 aaKnown RBP9.05□□□□□ -0.96
CDK9-205ENST00000498339 DHFR2Q86XF0 187 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 CCDC54Q8NEL0 328 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 ARPC1AQ92747 370 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 EME1Q96AY2 570 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 C10orf35Q96D05 121 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 S1PR3Q99500 378 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 ELAC2Q9BQ52 826 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms