RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 LIN7BQ9HAP6 207 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 NF1P21359 2839 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 AESQ08117 197 aa16.22■□□□□ 0.19
LIME1-205ENST00000480139 SCGB2A2Q13296 93 aa16.22■□□□□ 0.19
LIME1-205ENST00000480139 RBM39Q14498 530 aaKnown RBP16.22■□□□□ 0.19
LIME1-205ENST00000480139 ZNF273Q14593 569 aa16.22■□□□□ 0.19
LIME1-205ENST00000480139 ATXN7L3Q14CW9 347 aaPredicted RBP16.22■□□□□ 0.19
LIME1-205ENST00000480139 KLF17Q5JT82 389 aaPredicted RBP16.22■□□□□ 0.19
LIME1-205ENST00000480139 KRBOX4Q5JUW0 171 aa16.22■□□□□ 0.19
LIME1-205ENST00000480139 ATAD3CQ5T2N8 411 aa16.22■□□□□ 0.19
LIME1-205ENST00000480139 SFXN4Q6P4A7 337 aa16.22■□□□□ 0.19
LIME1-205ENST00000480139 METAP1DQ6UB28 335 aaPredicted RBP16.22■□□□□ 0.19
LIME1-205ENST00000480139 SLC16A12Q6ZSM3 486 aa16.22■□□□□ 0.19
LIME1-205ENST00000480139 TCF23Q7RTU1 214 aa16.22■□□□□ 0.19
LIME1-205ENST00000480139 GPR141Q7Z602 305 aa16.22■□□□□ 0.19
LIME1-205ENST00000480139 CORO2AQ92828 525 aa16.22■□□□□ 0.19
LIME1-205ENST00000480139 PTX4Q96A99 478 aa16.22■□□□□ 0.19
LIME1-205ENST00000480139 PCGF1Q9BSM1 259 aa16.22■□□□□ 0.19
LIME1-205ENST00000480139 URM1Q9BTM9 101 aaKnown RBP16.22■□□□□ 0.19
LIME1-205ENST00000480139 LPAR5Q9H1C0 372 aa16.22■□□□□ 0.19
LIME1-205ENST00000480139 METTL8Q9H825 291 aaKnown RBP16.22■□□□□ 0.19
LIME1-205ENST00000480139 UBE2J1Q9Y385 318 aaPredicted RBP16.22■□□□□ 0.19
LIME1-205ENST00000480139 hCG_1809904A0A1W2PP81 198 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 A0A1W2PPE2 198 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 A0A1W2PR64 198 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 A0A1W2PRV1 198 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 ODAMA1E959 279 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 HSPB6O14558 160 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 PDCD6O75340 191 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 GABARAPO95166 117 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 IL1AP01583 271 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 FUT3P21217 361 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 RPL5P46777 297 aaKnown RBP16.21■□□□□ 0.19
LIME1-205ENST00000480139 GLIPR1P48060 266 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 DLX6P56179 175 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 FAM189A2Q15884 450 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 RSBN1Q5VWQ0 802 aaPredicted RBP16.21■□□□□ 0.19
LIME1-205ENST00000480139 SIGIRRQ6IA17 410 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 RAB12Q6IQ22 244 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 VMO1Q7Z5L0 202 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 BPIFB2Q8N4F0 458 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 FAM89BQ8N5H3 189 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 TPRX1Q8N7U7 411 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 MXRA5Q9NR99 2828 aa16.21■□□□□ 0.19
LIME1-205ENST00000480139 TRGV10A0A0A0MS01 117 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 TMEM272A0A1B0GTI8 110 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 SMIM30A4D0T7 59 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 C17orf98A8MV24 154 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 MCRIP1C9JLW8 97 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 CA11O75493 328 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 ZNF728P0DKX0 622 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 RAB6AP20340 208 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 PRTN3P24158 256 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 SCAND1P57086 179 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 BPIFB3P59826 476 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 MXD1Q05195 221 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 SLC35E4Q6ICL7 350 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 CROCCP3Q8IVE0 287 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 C11orf42Q8N5U0 333 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 PLPPR1Q8TBJ4 325 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 ZNF714Q96N38 554 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 OR6C3Q9NZP0 311 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 DAPK2Q9UIK4 370 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 SCOCQ9UIL1 159 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 NUP50Q9UKX7 468 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 RAB22AQ9UL26 194 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 PEX16Q9Y5Y5 336 aa16.2■□□□□ 0.18
LIME1-205ENST00000480139 TRAV40A0A0B4J280 105 aa16.19■□□□□ 0.18
LIME1-205ENST00000480139 CLEC2LP0C7M8 214 aa16.19■□□□□ 0.18
LIME1-205ENST00000480139 SLC2A2P11168 524 aaPredicted RBP16.19■□□□□ 0.18
LIME1-205ENST00000480139 CCL3L1P16619 93 aa16.19■□□□□ 0.18
LIME1-205ENST00000480139 HOXB4P17483 251 aaPredicted RBP16.19■□□□□ 0.18
LIME1-205ENST00000480139 CHATP28329 748 aa16.19■□□□□ 0.18
LIME1-205ENST00000480139 LSM3P62310 102 aaKnown RBP16.19■□□□□ 0.18
LIME1-205ENST00000480139 NCR3LG1Q68D85 454 aa16.19■□□□□ 0.18
LIME1-205ENST00000480139 GAPTQ8N292 157 aa16.19■□□□□ 0.18
LIME1-205ENST00000480139 TNFRSF14Q92956 283 aa16.19■□□□□ 0.18
LIME1-205ENST00000480139 NICN1Q9BSH3 213 aa16.19■□□□□ 0.18
LIME1-205ENST00000480139 TAS2R3Q9NYW6 316 aa16.19■□□□□ 0.18
LIME1-205ENST00000480139 A0A0A6YYD4 124 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 TMEM30CPA0ZSE6 113 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 FOXI3A8MTJ6 420 aaPredicted RBP16.18■□□□□ 0.18
LIME1-205ENST00000480139 IGHV4-38-2P0DP08 117 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 TGFBR1P36897 503 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 CTF1Q16619 201 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 GPR157Q5UAW9 335 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 GPR107Q5VW38 600 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 ZNF497Q6ZNH5 498 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 C9orf139Q6ZV77 190 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 TRAPPC6BQ86SZ2 158 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 OR56B1Q8NGI3 324 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 NEK7Q8TDX7 302 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 NEDD4LQ96PU5 975 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 GAL3ST2Q9H3Q3 398 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 SIRT7Q9NRC8 400 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 KIF25Q9UIL4 384 aa16.18■□□□□ 0.18
LIME1-205ENST00000480139 MEIKINA0A087WXM9 373 aa16.17■□□□□ 0.18
LIME1-205ENST00000480139 CENPVL3A0A0U1RRI6 287 aa16.17■□□□□ 0.18
LIME1-205ENST00000480139 EPHA1P21709 976 aa16.17■□□□□ 0.18
LIME1-205ENST00000480139 RPS19P39019 145 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms