RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 SHISA3A0PJX4 238 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 TMEM89A2RUT3 159 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 DNAJC9-AS1A6NH13 148 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 SLC33A1O00400 549 aaPredicted RBP10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 PDCD5O14737 125 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 NPFFO15130 113 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 TMEM127O75204 238 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 CSTBP04080 98 aaKnown RBP10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 TMBIM6P55061 237 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 DEFB112Q30KQ8 113 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 GLT8D1Q68CQ7 371 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 OR52W1Q6IF63 320 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 BRD3OSQ6XYD6 125 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 SATL1Q86VE3 508 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 OSR2Q8N2R0 312 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 PIP4P2Q8N4L2 257 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 OR11H6Q8NGC7 330 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 ZDHHC16Q969W1 377 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 CENPOQ9BU64 300 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 BARHL1Q9BZE3 327 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 DPAGT1Q9H3H5 408 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 GAL3ST2Q9H3Q3 398 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 LINC00574Q9H8X3 128 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 IL36RNQ9UBH0 155 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 FAM96BQ9Y3D0 163 aa10.11□□□□□ -0.79
CLCNKA-205ENST00000477360 TRGV10A0A0A0MS01 117 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 ODAMA1E959 279 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 CA11O75493 328 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 MAS1P04201 325 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 ZNF44P15621 663 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 RAB3BP20337 219 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 OR3A4PP47883 348 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 EDDM3BP56851 147 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 RBM11P57052 281 aaKnown RBP10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 ZNF273Q14593 569 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 SLC9A3R2Q15599 337 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 CTF1Q16619 201 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 RNF144BQ7Z419 303 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 BATF2Q8N1L9 274 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 ZNF565Q8N9K5 539 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 BEND2Q8NDZ0 799 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 OR4S1Q8NGB4 309 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 OR13D1Q8NGV5 346 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 OR5R1Q8NH85 324 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 RAB2BQ8WUD1 216 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 C22orf15Q8WYQ4 148 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 C1orf147Q96MC9 270 aaPredicted RBP10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 GFI1Q99684 422 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 ELL3Q9HB65 397 aaPredicted RBP10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 SIRT7Q9NRC8 400 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 ST3GAL6Q9Y274 331 aa10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 TBL2Q9Y4P3 447 aaKnown RBP10.1□□□□□ -0.79
CLCNKA-205ENST00000477360 LOC100506127A0A0U1RQW1 187 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 ZNF701M0R085 212 aaPredicted RBP10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 SIRPB1O00241 398 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 SLC17A2O00624 439 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 SLC22A1O15245 554 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 BPNT1O95861 308 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 IL1AP01583 271 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 MELTFP08582 738 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 IGHV1-8P0DP01 117 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 HKR1P10072 659 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 DUSP1P28562 367 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 SAA4P35542 130 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 IER3P46695 156 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 GPR107Q5VW38 600 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 HCP5Q6MZN7 132 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 C16orf87Q6PH81 154 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 HEPN1Q6WQI6 88 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 TCF23Q7RTU1 214 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 RTN4RL2Q86UN3 420 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 JAGN1Q8N5M9 183 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 DTX3Q8N9I9 347 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 OR4M1Q8NGD0 313 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 OR10A7Q8NGE5 316 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 OR6M1Q8NGM8 313 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 DYRK2Q92630 601 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 FAM192AQ9GZU8 254 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 RBM38Q9H0Z9 239 aaKnown RBP10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 CST11Q9H112 138 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 MEGF9Q9H1U4 602 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 NDUFA13Q9P0J0 144 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 RCC2Q9P258 522 aaKnown RBP10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 SESN1Q9Y6P5 492 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 V9GY05 133 aa10.09□□□□□ -0.79
CLCNKA-205ENST00000477360 IGHV3OR16-10A0A075B7F0 116 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 A0A087X0M5 115 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 TRAV24A0A0B4J272 114 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 A0A0U1RQK1 487 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 A0A1B0GUS0 222 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 A0A1B0GX30 115 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 MEIOCA2RUB1 952 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 ZNF729A6NN14 1252 aaPredicted RBP10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 VGLL3A8MV65 326 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 CLPXO76031 633 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 CDRT1O95170 752 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 HTR3BO95264 441 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 CCL3L1P16619 93 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 CD34P28906 385 aa10.08□□□□□ -0.8
CLCNKA-205ENST00000477360 SDC2P34741 201 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms